Rhizoctonia solani: RhiXN_00978
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Entry
RhiXN_00978 CDS
T09256
Name
(RefSeq) RNA recognition motif protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
rsx
Rhizoctonia solani
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsx03019
]
RhiXN_00978
03041 Spliceosome [BR:
rsx03041
]
RhiXN_00978
Messenger RNA biogenesis [BR:
rsx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
RhiXN_00978
Spliceosome [BR:
rsx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
RhiXN_00978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Nup35_RRM_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
67023260
NCBI-ProteinID:
XP_043179809
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Position
4:complement(join(2889522..2889779,2889833..2890807,2890861..2890890))
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AA seq
420 aa
AA seq
DB search
MMNGPSAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGQNYGFV
EYMDMRAAETALQTLNGRKIFDTEIRVNWAYQGTQNKEDTSNHYHVFVGDLSPEVNDEVL
AKAFAAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA
NQKTQSGGGGGMPPGMPSMGDSMGMGGGAMGGVPAPMNFQGGPLSYESVVSQTPAYNTTV
YVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHENAAMAIVQLQGQLVHG
RPIKCSWGKDRSAADTGAPGSMITPATGAGAYGGVPMYGMPQPNAYAQYGFGGAGYGGFA
NGQGNAGMPQPNPAQAGAGMGMGQDNAAMGGQGNTAPGQWGASDPSAFYQQQAYWGGKFT
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatggaccaagtgctgaagcacctcgccgcgcccatctctacgttggcaatctg
tcgcctcgcgtgacagagtacatgctgaccgagattttcgcagtggctggtccggtgcag
cacgtgaaaatcattccagaccgcaactatcagcacggcggccagaactatggtttcgtc
gagtacatggacatgcgtgctgccgagaccgcgcttcaaacgctcaatggccgcaaaata
ttcgatactgaaattcgcgtgaattgggcataccaaggcacccagaacaaagaagatacc
agcaaccattaccatgtattcgtgggcgatttgtccccagaagtcaacgatgaagtcctc
gcaaaggcctttgcagcatttggcagcctcagcgatgcacgtgtcatgtgggacatgaac
tcgggcaagtcgcgtggatacgggttcctcgcgtttagggacaagaccgacgcggagcag
gcgattgctaccatgaatggcgagtggctcggctcccgcgcaattcgcgtcaactgggcc
aaccaaaagacccagtcgggcggcggaggcggaatgccacccggcatgccctcgatgggc
gattcgatgggaatgggtggtggagcgatgggtggtgttcctgctccaatgaatttccaa
ggtggcccgctctcatacgaatccgttgtctcccagacacccgcctacaatacgaccgtt
tacgtcggtaacctggttccctactgcacgcaggcagatttgattcctctgttccaatcg
attggctatctgtccgagatccgcatgcaggctgatcgagggttcgcgtttgtcaagttg
gacacccacgagaatgcggcaatggcgattgtgcagctgcagggtcagcttgtgcacggc
cgcccaatcaagtgcagctggggcaaggatcggagtgcagctgatactggtgcccctggc
agcatgatcacccccgcaactggggctggcgcctatggcggagtacctatgtacggcatg
cctcaacccaacgcgtatgctcaatacggattcgggggcgctggatatggcggatttgct
aatgggcaaggcaacgctggtatgccccaacccaaccccgcccaggccggagctggaatg
ggtatgggacaagacaatgccgccatgggtggtcagggcaataccgctcctggccagtgg
ggtgcaagcgacccgagtgcattctaccagcagcaagcgtactggggaggcaagttcact
tga
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