Rhizoctonia solani: RhiXN_01137
Help
Entry
RhiXN_01137 CDS
T09256
Name
(RefSeq) vacuolar protein sorting-associated protein, Vps52/Sac2 family protein
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
rsx
Rhizoctonia solani
Pathway
rsx03250
Viral life cycle - HIV-1
rsx04144
Endocytosis
rsx04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
RhiXN_01137
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
RhiXN_01137
04145 Phagocytosis
RhiXN_01137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsx04131
]
RhiXN_01137
Membrane trafficking [BR:
rsx04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
RhiXN_01137
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
FYVE
UIM
UIM_2
USP_UIM_N
GAT
FYVE_2
C1_1
Vps27_GAT-like
DZR_2
Motif
Other DBs
NCBI-GeneID:
67023419
NCBI-ProteinID:
XP_043179968
LinkDB
All DBs
Position
4:complement(join(3375614..3376506,3376556..3377359,3377410..3377530,3377584..3377682,3377739..3377905,3377954..3377999))
Genome browser
AA seq
709 aa
AA seq
DB search
MASYFWGPSVFDEAVDKATSELLPSGTDDIALSLEICDQIRSKSVQPRDAMRAIKRRLDH
KNPNVQILALGLTDVCIKNGGDHFLEQIASREFMDNMVSILKQPALNYEVKSKMLRLIQN
WALAFEAKPSLGYVPEVYRSLKNQGFNFPPPDTTAKAKALLATRTAPEWIDSDVCLRCRT
PFTFTNRKHHCRNCGQVFDQQCSSRTAPLPHFGIAQEVRVCDSCWTTLKMDKARAKSPEL
SRSKSTHSRSNSRKEPRQSHLGGDTADDDLQRAIALSLAEAQANASGYRDKSSYAPAVRS
EPPLAEHGEEDADLRAAIEASLRESQAPRASAPAPEEPSAGRPQWAAQPVLPKIPQYDLD
PREEDAILSFNQTIEQASSGVPVGPQAADMYERASVLRPKLVRSLEDASRKEYMLTEMHD
KLSEAVKLYDRLLTEQVERSTWRYQNSHAQQYGQPQQYGQPPQQYGYGQQQQYGQYAPQQ
QQQYASQPQEQPASLQQQSYSVPSAPQQYQPAPESYPAVPPAVQTNYPSAPPVTYQAPNQ
YASAPTSSPPVSRSPELQRHGSMTGQHAPVSIMNPTHPVSMYAPPPPQSPQQQTTTSSSY
PPQPYQAVNPASQPYQNVTSPAHLSRANTYQAPVQDSSHQVPSRANTYQAPNPYQVPSQP
QSYQGTTPAPLPNLPSVPPMLPSAPQGFPESQYGVEKTEQKEAMLISFD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttacttttggggaccttcggtgttcgacgaggccgtcgataaagccacgtcc
gaactactaccatctggcactgacgacattgctcttagtcttgagatatgcgaccaaatt
cgttccaaatctgtccaaccacgggatgccatgcgggcaatcaagcgtagactggaccac
aagaatcccaacgtccaaatactcgcattaggtttgacggacgtgtgcatcaagaatgga
ggtgaccatttcctagaacaaattgcgtcgcgggaatttatggacaatatggtgtctatt
ctcaagcaacctgcacttaattacgaggtcaaaagtaaaatgctacggcttattcagaac
tgggcgcttgcgttcgaggcgaaaccctctctcgggtatgtgccggaggtgtacaggtcg
ctgaagaaccaaggcttcaactttccaccgccggacaccaccgccaaagccaaggcgctt
ctcgccactcgtactgcgcctgaatggattgactcggacgtgtgtctgcggtgtcgaacg
ccgtttacgttcaccaatcgcaagcatcattgccgaaactgcggacaggtctttgatcaa
caatgctcgtctcgaactgcgccgcttccacactttggaatcgcacaggaagtacgagta
tgcgattcttgctggacgacattgaagatggataaagcccgtgcaaagtcgccggagctg
tctagatctaaatcaacccactcgcgctccaactcgcgcaaggaaccacggcagtctcat
ctgggtggtgatacagcagatgacgatctgcagcgtgctatcgcactttcgctggctgag
gcgcaggcgaacgctagtggatatcgggacaagtccagttatgcgcctgccgtacggtcg
gaacctccattggcagagcacggcgaagaggatgctgacttacgggcagccatcgaggcc
agtttacgtgaatctcaggcacctcgtgcctcagctccagcacctgaagaaccatcagcg
gggagaccgcaatgggcggcgcaacctgtattaccaaagatacctcagtacgatcttgac
ccgagggaagaggatgcaattctatcgttcaaccagacgatcgaacaagccagctctggt
gttccggttggaccccaggcggctgatatgtacgagcgcgcgagtgttttgcggcccaag
ctcgttaggagtctggaagatgcgagtagaaaagagtatatgctcaccgaaatgcatgac
aagttgtccgaagccgttaagctttatgatcggttattaacggagcaggttgagcggtca
acatggaggtatcagaactctcatgcacaacaatacgggcagccccagcaatatggccag
ccacctcagcagtatggatatgggcagcagcaacaatatggacaatatgctccacagcaa
cagcagcagtatgcctctcaaccccaagaacaacctgcttcgctacaacagcaatcatac
tctgtcccttctgccccacagcaatatcaacctgcgcccgaatcttacccggctgtacca
cctgctgttcaaacaaactatccatctgctcctcccgttacgtaccaagctcctaatcaa
tacgcctccgcccccacatcttccccgcctgtttcgaggtcgcccgagctgcagagacat
ggttcaatgactgggcagcatgcgccagttagcattatgaacccaacgcacccggtttcg
atgtatgcacctccacccccacagagtccacaacaacagacgaccacgagctcttcttac
ccaccacagccatatcaagctgtcaaccccgcgtcgcaaccatatcagaacgtcacttcc
ccggcacatctttcccgagcgaatacctatcaagcacctgtgcaggacagttctcaccag
gtaccctccagggccaatacgtaccaagcaccgaatccataccaggtaccctctcagcca
caatcgtatcagggtaccactcctgcgcctcttcccaatttacctagtgtgccaccaatg
cttccgagtgcacctcaaggattcccggagtctcagtatggtgtggagaagacagagcaa
aaggaggccatgttaatttcttttgattga
DBGET
integrated database retrieval system
