Rhizoctonia solani: RhiXN_01339
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Entry
RhiXN_01339 CDS
T09256
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rsx
Rhizoctonia solani
Pathway
rsx00040
Pentose and glucuronate interconversions
rsx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RhiXN_01339
Enzymes [BR:
rsx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
RhiXN_01339
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
DnaJ-like_C11_C
Motif
Other DBs
NCBI-GeneID:
67023621
NCBI-ProteinID:
XP_043186981
LinkDB
All DBs
Position
16:join(387185..387309,387371..387540,387594..387655,387719..388047,388109..388272,388326..388423)
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AA seq
315 aa
AA seq
DB search
MKFTSALVLAIGLGVASASPVVEKRASTSDKANIGYATLSGGTTGGGSASAVTVTTLSAL
KSAVSGNSAKVVIVSGNISGNEVIKVGSNTSVLGKSGATLTGVGLRVIDVSNVIIRNLKI
NKVLAGAGDHVAVQSANRVWIDHVELWSDQTHDKDYYDGLLDLTHGVYAASVTNSYLHDH
WKASLVGHSDSNESEDKAIQVTYAFNKWQNLNSRTPSFRFGHGHIYNNYFVSNNDGINTR
VGAELLVQNNVFESVKKPLYSTDNGYANASGNDFGGASNTAATTSWSSVGYSYSLTAVGS
VKSYVNSNAGAKLSF
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcacctccgctctcgttcttgccatcggcctcggtgtcgcttccgcctctcca
gttgtcgagaagcgcgcttccaccagcgacaaggccaacatcggctacgccactctcagc
ggcggcactaccggtggaggctctgcatccgccgtgactgtcaccactttgtccgccctc
aagtccgccgtgtccggcaacagcgcaaaggtcgtcattgtttccggcaacatcagtgga
aatgaagtcatcaaggtcgggtcgaacacatctgttctcggaaagtctggtgccaccctg
accggtgtgggtctgcgcgtgatcgatgtgtcgaacgtcatcatccgcaaccttaagatc
aacaaggtcttggccggcgccggcgaccacgtcgccgtccagtccgctaaccgcgtgtgg
atcgaccacgtcgagctgtggtccgaccagacccatgacaaagactactacgatggcctt
ctcgacctcacccacggcgtgtacgccgcatcagtcaccaactcctacttgcacgaccac
tggaaggcgtcgctcgtcggacattccgacagcaacgagagcgaggacaaggcaatccag
gtgacgtacgcgttcaacaagtggcagaacctgaactcgcgcacgccctcgttccgcttc
ggccatggccacatctacaacaactactttgtgagcaacaacgacggaatcaacacgcgt
gtaggcgcagagctgcttgttcagaacaacgtgttcgagagcgtgaagaagccgctgtac
agcacggacaacgggtatgcgaacgcgagcggcaacgattttggaggagccagcaacact
gctgctactacgtcgtggagctctgtcgggtattcttacagtttgaccgcggtgggatct
gtgaagtcctacgtgaactcgaatgctggcgccaagctgtctttctaa
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