Rhizoctonia solani: RhiXN_01527
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Entry
RhiXN_01527 CDS
T09256
Name
(RefSeq) pre-mRNA-splicing factor SLT11
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
rsx
Rhizoctonia solani
Pathway
rsx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
RhiXN_01527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsx03041
]
RhiXN_01527
Spliceosome [BR:
rsx03041
]
Complex B
Other components
Prp19-related factors
RhiXN_01527
Complex C
RhiXN_01527
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
Torus
RRM_YTH1
zf_CCCH_4
zf-CCCH
zf-CCCH_PARP12
zf-CCCH_3
zf-CCCH_4
RRM_1
zf-CCCH_10
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
67023809
NCBI-ProteinID:
XP_043187169
UniProt:
A0A8H8P9S3
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All DBs
Position
16:complement(join(937023..937349,937401..937542,937594..937775,937817..938080,938133..938161,938217..938283))
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AA seq
336 aa
AA seq
DB search
MPKADINKAGWEQSDFPILCETCLGDNAFVRMSKQEYGRECGTCARPFTVFRWKAGAGGR
FKSTVVCQTCAKIKNVCQTCLLDLEYGLPVQVRDTALGRKNEAPSSEVNREYYAQNMDGK
VWSSQLEANQSLLDSSRASSAAKDMLKSLARTDPYYKRNRAHLCSFFAKGECNRGNECPY
RHELPKENELSHQNIKDRFYGRNDPVAKKILSVHATKQGLEPPEDQSITSLFISSLPADA
TEASVRTALLNSIPFIPPTAVKSVVHVEKSRCAFINFKERKDTERAAEAWAGGVEVDGTK
VNVKWGRSRGAAAGATPSASTSSGSGMATRMVTAAD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggcagacatcaacaaggcaggctgggagcagagtgactttccaattttatgc
gagacatgtctcggcgacaatgcgtttgtcaggatgtctaaacaagagtatggcagggaa
tgcggaacttgtgctcgtccattcaccgtatttcgctggaaagcaggcgctggtggtcgc
ttcaagtcgacagtagtctgccaaacttgtgcgaaaatcaaaaacgtctgccaaacgtgt
ctgcttgatcttgaatacggtcttccggtccaagttcgagacactgcattggggcgaaag
aacgaggcgccgagtagtgaggtcaacagggagtattatgcccaaaatatggacggaaag
gtgtggtcatcacagcttgaagccaaccaatctttgctcgattcttcaagggcatcatcg
gctgccaaagacatgttgaaatcactcgctcgtactgacccttactacaaacgtaaccgg
gctcatctgtgttctttctttgcgaaaggcgaatgcaatcgtggcaacgaatgtccctac
cggcacgagctaccgaaggagaacgagctatcccatcaaaatatcaaagacagattttat
gggcgcaacgatcccgtagcaaaaaagatcctctcggtacatgcaacaaaacagggcctg
gaacctccagaagatcaatcaattacctctttgttcatttcgtccctgccagcggatgcc
accgaggcatccgtacgaactgctcttctcaactcgattcccttcatccctccgacggct
gtaaaatcggtcgttcatgtcgaaaagagtcgatgcgcattcatcaactttaaagaacgc
aaggatacggagcgggcggccgaggcgtgggctggcggagtcgaggtagatggtaccaaa
gttaacgtcaagtgggggcgatctcgtggagcggccgcaggagcgacgcccagcgcaagc
acatcgagtggcagcggaatggcgacccggatggtcactgctgcagattaa
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