KEGG   Rhizoctonia solani: RhiXN_01593
Entry
RhiXN_01593       CDS       T09256                                 
Name
(RefSeq) 5'-3' exoribonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
rsx  Rhizoctonia solani
Pathway
rsx03030  DNA replication
rsx03410  Base excision repair
rsx03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RhiXN_01593
   03410 Base excision repair
    RhiXN_01593
   03450 Non-homologous end-joining
    RhiXN_01593
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsx03032]
    RhiXN_01593
   03400 DNA repair and recombination proteins [BR:rsx03400]
    RhiXN_01593
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsx04147]
    RhiXN_01593
DNA replication proteins [BR:rsx03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    RhiXN_01593
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     RhiXN_01593
DNA repair and recombination proteins [BR:rsx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     RhiXN_01593
Exosome [BR:rsx04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   RhiXN_01593
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc AAA_15
Other DBs
NCBI-GeneID: 67023875
NCBI-ProteinID: XP_043187235
LinkDB
Position
16:join(1121431..1121487,1121547..1121677,1121729..1121831,1121888..1121951,1122011..1122120,1122181..1122231,1122319..1122471,1122529..1123221,1123279..1123343,1123396..1123564,1123622..1123678)
AA seq 550 aa
MGIKGLTGLLSEHAPASIKEHDIKTLFGRKVAIDASMSIYQFLIAVRQQDGQMLTNEAGE
TTSHLMGFFYRTLRMVDHGIKPAYVFDGKPPDLKSGVLSKRFEGRQKAKEDGEEAKEVGT
AEDVEKFARRTVRVTREHNEECRKLLKLMGIPCVVAPSEAEAQCAELARGGKVYAAGSED
MDTLTFNAPVLYRHLTFSEAKKAPISEIVLEKALEGLGMNMEQFTELCILLGCDYLEPIK
GVGPKNAFKLMQEHGSLEEVLKVLRAKMAEREEADLKKEHKAKSTSKKGSKPSKSKKKDE
EDEDEAMESEEEEKPKAKKQKSTKSKNRIESDDEEGSDPWDDTEAVSSPARDSSPTRASS
PAASSEAGMKIDEDEDTKVTSASEIKDGAAEDDKDHKMEDVAAKADDAETKADEAPKKPA
PVRRGGIHVPDYYPWEEAKKLFLQPDVTPADQVELVWEAPDVDGLVKFLVVEKGFNEERV
RKGAEKLTKMLNTKQQGRLDGFFKVTESASSKAKATAGKGAASSKGAGAKRKADEKKDTG
GKKAKTGGKK
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgggtatcaaaggccttactggattgctctccgaacatgctccagccagcatcaaagag
catgacattaaaacattgtttgggcgtaaagtcgcaatcgacgcgtctatgagcatctac
cagttccttatcgcggttagacaacaggatggacaaatgctcaccaatgaggctggcgaa
accacaagtcacctgatgggctttttctatcgtacccttcgcatggtagatcacggtatc
aaacccgcatatgtattcgatgggaaacccccagatctcaagtctggcgtgctctcgaag
cgatttgagggccgacagaaagcaaaagaagatggggaggaggctaaagaagttggtacg
gccgaggatgttgaaaagtttgcgaggcgaaccgtacgtgtgacgcgtgaacataacgag
gaatgtcggaagcttctcaagttgatgggtatcccatgtgtcgtagcaccatctgaggcg
gaggcgcaatgtgcagagcttgcacggggcggtaaggtatacgccgcaggctccgaagat
atggataccctgactttcaacgcacctgtattgtaccgacatctcacgttttccgaagca
aagaaagcacccatctccgaaatcgtcctcgagaaagctctggagggacttggcatgaat
atggagcagttcacggaattgtgcatattactggggtgcgattatctcgagcccatcaaa
ggggtaggacctaagaatgcgtttaagctcatgcaagagcacggaagcttggaggaggtt
ctaaaggttcttcgagccaaaatggctgaacgagaagaggcggacctcaagaaggagcac
aaggcaaaaagcacgtccaaaaagggatctaagccatccaaatccaaaaagaaggacgaa
gaggatgaggacgaagcgatggagtctgaagaagaagaaaagccaaaggcgaaaaaacag
aaaagcacaaagtctaagaacaggatcgaatcagacgatgaggaggggtctgatccctgg
gacgatacagaagctgtttcatcgccagctcgcgattcgtcccctacacgcgcatcgtct
cccgctgcgagctcagaggctggtatgaagatcgacgaggatgaagacactaaagtgact
agcgcgagtgagataaaggacggagccgcagaagatgacaaggatcataaaatggaggac
gttgcagccaaagcggacgatgccgaaactaaagcggatgaggctccaaagaaacctgct
cctgttcgccgcggtggtattcacgttccagactactacccatgggaagaggcgaagaag
ctctttttgcaaccggacgttacccctgccgaccaagtagagcttgtgtgggaagcacca
gatgtcgatggattagttaagttccttgtggttgagaaaggttttaacgaagagcgggtc
cgtaagggtgccgaaaagctcacgaagatgctcaacaccaagcagcaagggagacttgat
ggattcttcaaagttaccgagtcggcgagctcgaaagcaaaggctaccgcgggtaaaggc
gcagcgagcagcaagggcgctggtgctaagcggaaggcggacgagaaaaaggacactggt
ggaaagaaggccaagactgggggcaaaaagtaa

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