Rhizoctonia solani: RhiXN_01636
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Entry
RhiXN_01636 CDS
T09256
Name
(RefSeq) RNA recognition motif protein
KO
K14787
multiple RNA-binding domain-containing protein 1
Organism
rsx
Rhizoctonia solani
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsx03009
]
RhiXN_01636
Ribosome biogenesis [BR:
rsx03009
]
Eukaryotic type
90S particles
Other 90S particles
RhiXN_01636
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_11
RRM_MUD2_C
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
67023918
NCBI-ProteinID:
XP_043187278
LinkDB
All DBs
Position
16:complement(join(1254029..1254335,1254394..1255151,1255199..1255342,1255395..1255673,1255847..1256452,1256510..1256681,1256731..1256832,1256881..1256885))
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AA seq
790 aa
AA seq
DB search
MWSRLIVKNLPAYVDDSQLRKHFTQPDALKPGQPSTAVPLNLTDVRLARRPDGKSRRFAF
LGFKTNEEAIAARKYFDRTYIGGSRISVEVVDSAKLQEPGKKRARTSKQEVRHEEPTDTS
SHERAKATDVELSGASKSSKAQDDFIEAFTRRSKGPSWLDSDAGTAAAFEAVTKQSSFQK
TPSEEQRSENENENDQIVENGESVPMSDLDWMRARMKKNLDEDLVEKPFYQDNSHEEIEV
EHASPANAVDPLPESPEISTATPFQTRRLFLRNLAYVCTEDEIRSEFSRFGTVEQVHMPL
TSERTSKGLAYVSFTDTDSAERALKGMDHASFQGRLLHVMPAVTRAGKGEADSRSLSADK
KASLKKEKATKRKENAGQDFNWGMLYMNSDAVLSSVADRLNISKAEVLNPEASNASVRLA
LAETKVIEETKSFFEQQGVSLESFKSRTKSDTIILVKNIPYGTTADTLREMFSPFGDLSR
ILLPPAGTLGVVEFVHAVDASKAFKAIAYRRIKDSIIYLERGPAGMFTQASSNKPSDTKY
PSVASAVQPVSVAEVAADDSETPPGATLFVKNLAFATTEEILNSAFRSLPGFAFARIQTK
PDSKRPGARLSMGFGFVGFRSVESAQRALSGMQGAIVDGHALQVKFAKRGEVDNQGGAVT
SVGATKTTKMIVKNLPFEATKKDVRELFSAYGQLKSVRVPRKFNSQTRGFAFLDFISRRE
AENAFTALQHTHLLGRHLVLQWAEDGAVDIEQLRQTTKTGWGDGANIPGRKRKVDMLLDG
ADGTSGEIED
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtggtctcgtcttattgtgaaaaacctcccagcgtacgtcgatgacagtcaactacgt
aaacactttacccagccggacgcattgaagcctggacaaccctcgaccgcagtgcctctc
aatttaactgatgtgcgtctggcgcgacgcccagatggtaaatcacgtcgttttgcattc
cttggcttcaagacaaatgaagaggcgattgctgccaggaaatacttcgatcgtacatac
ataggggggagtcgtatctcggttgaagttgtggattcggcgaagcttcaggagcctggc
aagaaacgtgcgcggacttcgaagcaagaggttcgtcatgaggagcctaccgatacttct
tcacacgaacgtgcgaaagcgaccgatgtcgagttatctggggcttcaaaatcttccaaa
gctcaggatgacttcatcgaggcattcactcgccgcagcaagggtccttcctggctagac
agtgacgccggaacggcggctgcattcgaggccgtgaccaaacaatcgtcttttcaaaag
acaccatccgaagaacagcggtcagaaaacgaaaacgagaacgatcaaattgtggaaaat
ggtgaatctgtccctatgtctgatttagactggatgcgtgccagaatgaagaaaaacttg
gacgaagaccttgttgagaaacccttttaccaagacaactctcatgaagagatagaagtt
gagcacgctagtcccgccaatgccgtcgatcccctcccagaatcgccggaaatatccacc
gccacccccttccaaacgaggagattgttcttaaggaatttggcatatgtgtgcaccgag
gacgagatccgcagtgaattcagtcgttttggaactgttgagcaggttcatatgcccctg
acctcagagcgcacatccaagggtctggcctatgtatctttcactgacactgattcggcg
gagcgggccctcaaggggatggatcatgcttcgttccaaggccgcctccttcacgtcatg
cctgcggtcacaagagccgggaaaggagaggctgactcccgaagcttgtcagcggataag
aaggcaagcctcaaaaaggagaaggctacaaaacgaaaagagaatgcaggccaagatttc
aattgggggatgttatacatgaatagcgatgctgtgctgtcttctgtggccgatagactc
aatatttcaaaagctgaagttcttaatccagaagcgtcgaatgcgtccgttcgactagca
cttgcggaaacgaaggtcattgaagagacgaaatcatttttcgagcagcaaggtgtatct
cttgaatcctttaaatcccgtaccaaatccgataccattatcttggtaaagaatatacca
tatggaactacagcagataccctccgcgaaatgttctcgcccttcggagatctctcgcgt
atcttattaccgcccgctggtactctaggagtcgtggaatttgttcacgcggtagacgca
agcaaggcattcaaggctattgcgtacaggaggataaaagattcaatcatttatctcgaa
cgcggcccggcggggatgtttacgcaggcttccagtaataaaccttctgacacgaaatac
ccgtctgtagcttctgcagtccagccagtttctgtcgcagaagtggctgccgatgactcc
gaaactccacctggcgcaacgctattcgtaaaaaacttggcttttgcaacgacagaagaa
atcttgaactctgcatttcgctctttgcctgggtttgctttcgcgcgtatccagacgaaa
ccggactccaaacgacctggcgcacgccttagtatgggctttggtttcgtcgggtttcga
agcgtcgaatcggcccagagggctctgtctggcatgcaaggtgccattgtcgatggacat
gctctccaagtcaaattcgccaaacgtggagaggttgacaatcagggcggtgccgtgaca
tcagttggcgctacaaagaccacgaaaatgatcgtcaaaaacctgcccttcgaagccacc
aaaaaagatgttagagaattattcagcgcatacggtcaactcaagtctgtccgcgtgccg
cgcaaattcaactcacaaacccgagggttcgcattcttggatttcatatcacgtcgtgaa
gccgaaaatgcgtttacggcgttgcaacacacgcatttactcggtcgccacctggtactt
cagtgggcagaggacggtgctgttgatattgaacaattacgacagacaaccaagaccgga
tggggtgatggagccaatattcctgggcgtaaacgaaaggttgatatgttgttagatggg
gctgacggtacatctggggaaatcgaggactga
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