Rhizoctonia solani: RhiXN_01668
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Entry
RhiXN_01668 CDS
T09256
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
rsx
Rhizoctonia solani
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsx03036
]
RhiXN_01668
Chromosome and associated proteins [BR:
rsx03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
RhiXN_01668
microRNA pathway
RISC loading complex
RhiXN_01668
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
DEAD
Dicer_dimer
Helicase_C
ResIII
SLFN-g3_helicase
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
67023950
NCBI-ProteinID:
XP_043187310
UniProt:
A0A8H8T412
LinkDB
All DBs
Position
16:complement(join(1337948..1338200,1338258..1338720,1338772..1339053,1339125..1341841,1341892..1342058,1342110..1342247,1342296..1342379,1342441..1342545,1342606..1342713))
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AA seq
1438 aa
AA seq
DB search
MADSAITQVAVAEATGRLIPRLYQQEIFQRAVNENVICAMDTGSGKTQIAVMLLKHIMSL
RPADSNPKKASVAVFLVASVPLAEQQGDFLESQLPLHVNKFYGAMGVDYWDRERWAKAFA
ESDVMVMTAQVFHDLLNHAHWSIDKVLLLVFDEAHHCNKNHVYAQIMRTHYHHCPVSERP
RIFGMTASPIFNIRNPAQSLAQLQETMDAKVLAVKDNVLELALNAPKPQEFVMECPPPSS
DYSDYPRPTMWSVVSEFENLLFPDPDDLKDLTSRYKHALNELGPLAADYFVLLFIRRAIE
KSTVGSSELGAYFSRASSLAPETGGDSSPVAGQTWSDLDNAYNEHLATIQERARGLDKSQ
MMSWLTPKLKILISILEANRADDFSALIFVEQRQVASALAWLLPLVPELRDWVKAAALVG
HGDGSRAGFEGSGMAHAAQRSTVRNFRSGSINLVIATSVAEEGLDFQACKLVVRLDAPQT
MVGYLQSRGRARKHDSAYVVLTDPEGAKRYRGFRGAEPHLRRIYQRISEEEAQQDGEMDV
EEEEDVDNERYVVKSTGAVVTPSTAIGLLHLWCSQLEVDRFTKPPAPEFHITGKYMCKIS
APPCILNPALSGPIHGPLKKTRDGARRAAAFLFVQKLHKLEIFDDYLLPFKKRSSKADDL
SQRLDGTLRREGELFDTITPWGDVWHSGSPVWMNPISLDGSPTLVALVTGNNQPERELTI
HKGDSFVKIKIHRGCLLEFASEEDKLARLEAMQRYSNCAIFWAITARKLPPRSTCLIAPL
IGPEGLPDYDRMSNLATHAVKLSKEEWLNPELVGSLVMEAHRLGSTLYEFLGIKTGVDLS
SCPISLEDGTKCRENAHETYRSYWEAATGTVKRGLALDIPEGDHWLELVSISKAQLQSHN
GLYGLVKITGSEQPTAKPSQIVTPSHMARISPIPADIVRIVTHLPNLLGQMTVLFRIDSA
KEILRTNGVPLELLLEALTLPSVQAGFDYQRLETIGDSVLKVSMCTHLFIKYQGHHEGQL
SAMKDSVVSNANLMRVGRQSPLSRFLITGSMPTRRTWSPPASSTISETQDDSGEQDDSNE
QKDDSNEQKENDSKGEFEKTSFHTKAQSTLGATYLSRGVEAALEVGEALGLPLGGTTPWH
LRREVDVFARKSEITMLFAPVEEKLGYKFKNASLVAEAFTHTAYDLSQGPSYNRLEFLGD
SLFDLYVVKFMYLKFPKMTPGQMSWARSRLVNASTFGKLAVGLELHKHILTSSANLQKAV
ASFAQEVEEISLEEILQICWKIDAPKAISDVFEAIFGAIYVDSSFNLELTFEHIHRVMAN
IMEYVTPVMQGDPTSELVRWVASQGCEAQGSTIFRSSSSSNSRASTNDTVETTVHGRTIS
RVTAATSKLARPMAAEQALNILTDETHDYALSKICSCPRAKLKRKASDPIILERCFRA
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggccgattctgcgatcacacaggtggctgttgcagaggccacaggaaggttaataccc
cgtttatatcagcaagagatcttccaacgagctgtcaacgaaaatgtgatttgcgcgatg
gacaccggaagtgggaaaacccaaatcgcagttatgctgctcaaacacatcatgtcacta
cggccagcagactctaatccaaaaaaggcaagtgtcgcagtatttctcgtagcttctgtc
cccttggcggagcaacagggagacttcctagaatcccagttaccgctacacgtgaataaa
ttctatggggcaatgggggtcgactattgggatcgagaacgctgggccaaggcctttgcg
gaatcagacgttatggttatgacagctcaggtatttcacgacttgctaaaccatgcgcat
tggagtatcgataaggtattactcttggtctttgatgaggctcaccactgcaacaagaat
catgtttacgcacaaatcatgagaacacactaccaccattgtccggtcagcgaacggccg
cgcatatttggaatgactgcgagtccgatattcaatattcgcaaccctgcacaatcgctc
gcgcaactccaagaaactatggatgccaaagttctggctgtgaaggacaatgttcttgaa
ttggcgttgaatgcacccaagccccaagagtttgttatggagtgtcctcctcctagttcg
gactactctgattacccaaggcctaccatgtggtccgtagtatccgagtttgagaacctg
ctattccccgatcccgacgaccttaaagatctaacttcgcgatacaaacatgcactcaat
gagctgggacctctagccgccgattatttcgtgcttctttttattcggcgagccatcgaa
aagagtactgtcggatcgtccgaattaggcgcctacttctcgagagcgagttcattggcc
cccgagactggtggggattcaagcccagtggctggccagacctggtcggatttggacaac
gcatacaacgaacatctggctacgatccaagagcgagcaagaggacttgacaaatcgcag
atgatgtcttggctcacgcccaagttgaagattctaatctccatcctcgaggccaatcgg
gctgatgatttcagtgctttaatcttcgtcgagcaacgccaggttgcatctgcactcgcc
tggctgttgccccttgttccagagttgcgagactgggtcaaagcagctgctcttgtaggt
cacggcgatggaagcagggcaggtttcgagggaagtggtatggctcatgcagcacaacgg
tctactgttcgcaatttccgctcgggcagcatcaatctcgttattgcaacatcagttgct
gaggaaggtctcgatttccaggcctgcaaactcgtggtacgtctcgatgctccgcagacc
atggtaggataccttcagagccggggacgggctcgcaaacacgattctgcttatgtcgtg
ttaacggatccagagggcgctaaacgataccgtgggtttcgaggggctgaacctcatcta
cggcgcatataccagcgtattagtgaagaagaggcgcaacaagatggtgaaatggacgtt
gaagaagaagaggacgttgataacgaacgctatgtcgtcaaatccactggcgcagttgtt
actccttcgaccgccatcggcctcttgcatttgtggtgctcccagctcgaggtcgaccga
tttaccaagcctccagcaccagagtttcatattactggtaaatacatgtgcaaaatctcc
gctcctccgtgcattctcaaccctgcactttctgggcccatacatggtccccttaaaaaa
acacgagatggcgctcgacgtgcagctgcctttctttttgtccaaaaactacacaagctc
gagatattcgacgattatctattgccttttaagaaaaggagctcaaaagccgatgaccta
tcccaacgcctggacggcactcttcgaagggagggcgaacttttcgatacgattacgccc
tggggcgatgtatggcactctggctctcccgtttggatgaacccaatatcgctcgatgga
tccccgacccttgttgctttagttacggggaacaaccagcccgagcgcgagctcaccatt
cacaagggagattcttttgtcaaaataaagatacaccgtggctgccttctcgaatttgct
tctgaggaggataaactggcccggctcgaagcaatgcaacgctacagtaattgcgcaatc
ttctgggctattactgcccgaaagcttcctccccgttccacttgcttgattgctccgttg
attggtccagaaggactccctgactatgataggatgtcaaatctagccacccacgctgtg
aagctttccaaggaagagtggctgaacccagagcttgtaggtagtcttgtcatggaagcc
caccgactcggctccaccctctacgagtttttgggaatcaagacgggtgttgacctgtcc
tcttgtccaatctcactcgaagatggcaccaagtgccgagaaaatgctcatgaaacgtac
cgatcctactgggaggctgctacgggcacagttaaaagggggcttgctttagatataccc
gaaggcgatcattggcttgaacttgtctccatatccaaggcgcaattacaatctcataat
ggcttatatggcctagtcaagattacaggtagcgaacaaccgaccgcaaagccatctcag
atcgtcaccccatctcatatggcccgaatatctccaattccagccgatattgtaagaatc
gtaactcacctccccaacctcttggggcaaatgacggtactattccggatcgactcggcc
aaagaaatcctacgaacaaatggcgtaccgttagaactcttactcgaagctctgacactc
ccttccgttcaagccggcttcgactaccagcgcttagaaaccatcggagactccgttctc
aaagtatctatgtgcactcatcttttcataaagtaccaaggtcatcacgagggacaatta
tccgccatgaaggatagcgtagtttcaaacgctaatctcatgagagtaggcaggcagtct
ccgttatctcgattcctcattactggttcgatgccgacgcgtagaacatggagccctcca
gcatcttcaaccatcagcgaaacacaggacgattctggtgaacaagatgattccaacgaa
cagaaggacgattctaacgaacagaaggaaaacgacagcaaaggagagtttgagaaaact
tctttccataccaaggcacagtcaacactcggtgcaacctaccttagccgtggtgtcgaa
gccgccctcgaggtaggggaggcgctagggcttcctcttggcggaacaacaccatggcat
ttgcgccgagaagtagacgtttttgcgagaaaaagcgagataactatgctctttgctcct
gtagaggagaaacttggatacaagtttaagaacgcttcccttgttgccgaagcattcacg
catacagcctacgatctatcacaggggccctcatataatcgtctagagttccttggagat
tcgcttttcgatctttatgtggtcaagttcatgtacctgaaattccccaagatgacacca
gggcaaatgtcttgggcacgtagccgacttgtaaacgcatccacgttcggaaagctagct
gtgggactcgaacttcataaacacatcctcacttcatcagcaaacctccagaaagcagtt
gctagctttgcgcaggaggttgaagaaatatcattagaagaaattcttcagatttgctgg
aagattgatgcgcccaaggccattagtgacgtattcgaggccatctttggggcgatttat
gtcgattcgtcttttaatctcgaactcacatttgagcacatccatcgagtcatggccaac
attatggaatatgtcacgccagttatgcagggggacccaacttcggagctggttcgctgg
gtcgcgtcacagggctgcgaagcccaagggagcacgatattcaggtcaagctcaagttca
aacagtagagcttcgaccaatgatacagttgaaacaaccgttcatggtcgtactatctca
cgggtgacagccgcaacttccaagcttgcgaggccgatggcagccgagcaagcactgaat
attctaacggacgaaactcatgactatgcattatccaagatttgttcatgcccgcgtgca
aagctcaaacggaaggcttccgatcctatcattctggagcgatgctttagagcatag
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integrated database retrieval system
