Rhizoctonia solani: RhiXN_01688
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Entry
RhiXN_01688 CDS
T09256
Name
(RefSeq) DNA repair protein RHP42
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
rsx
Rhizoctonia solani
Pathway
rsx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RhiXN_01688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsx03400
]
RhiXN_01688
DNA repair and recombination proteins [BR:
rsx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
RhiXN_01688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_2
BHD_1
Transglut_core
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
67023970
NCBI-ProteinID:
XP_043187330
UniProt:
A0A8H8P955
LinkDB
All DBs
Position
16:join(1404362..1404552,1404611..1404731,1404784..1404794,1404844..1405147,1405179..1405664,1406027..1406189,1406382..1406533,1406585..1406983,1407039..1407120,1407175..1407230,1407316..1407402,1407492..1407663,1407758..1408365)
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AA seq
943 aa
AA seq
DB search
MESTDEEDFWDEVEVPQPVSYTVAETIEIPLTETEPRQPLDYDIEVTITKKGASTNEQQA
EAIAKRQAAAHNRLVRLESHKLHTISLLASLSIRNKWLNDQALKARLLAHPDPARRGRLF
ETALVRLVSWFAPSSPATTQNLYVERPSDGWFRITNPGHIKSHTFEAGMRRIQVLEKREA
ERKARRAKRQERRAKRARARIKGKGKARDIKIWMLVTEDEWYAPERLRSPNSIAKHALQR
SGSRDMAALVFVAIVRALGIPARLVSSLQCVPWALPKDYASKARKPKDKTTVTSKRDDQD
TAVDEDAMPGVSSRVGSPNSTGANSVLSATAYHTDRSADHSDNPTRLKPSIKRKRGPGTG
NNPISMIEGNQAPTLWAEVFSRPDGRWIPVDPVRGFVNRAGLFERRDQAGKRKAEKLMYV
VAMEEDGYARDVTARYAKNFGAHQARARARIAAGRKNGKVEWWDSVMRVLKRPYALHRDD
VEDAELSHQRALEGLPSSISAFKDHPIYALERHLRRDEAIHPRTEIAHFRGEPVFPRRNV
LSLKPAEGWMRQGRVLRSGMQPIKMVKARASTIRKKRELEVRREDEGEVMVGMYAEWQTE
LYKSPPVIDGKIPTNDFGNIDLYVPTMLPEGAVHIPQKGCAKVARKLGINFAEAVTGFEF
RNRQATPIITGIVIAAGNEQVFLEALASHIRLEQAKEATKRRERVLQRWTRLVQGLRIVQ
RVNEQYSGDNRPGIDENASADGTWSFLDDLKDVVRPYNLPQAQPIVPKLITEEEDRGVSE
LMMPQELLHGMPDSPSRYTWSALMEDDERHDEHAELESPTELMSRDTTNMEPPLTMQELA
DKLSRAREQGNSEPTNGETEVIPDATTPPLPEMESDRHVTKASPEDNDAKPNPIDNRSEA
NQNNTGKTTRQLRRSSRRHNALSTTPAPATPTPTRTLRPRRKP
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggaatctaccgacgaagaggacttctgggatgaagttgaagttcctcagccagtgtct
tacacggtagccgagactatcgaaataccattgacagagacagagccccgccaaccacta
gactacgacatcgaggtaacgataaccaagaaaggtgcttcaaccaacgaacaacaggcc
gaggctatagcaaaacgacaggctgctgctcacaatcgacttgttcgtcttgaatctcat
aaattacacactatatcgcttttggcctctctgtctatacggaataaatggttaaacgac
caagcgcttaaggctcgactattagcacatccggaccccgctcgtcgagggagattgttt
gaaacagcgctcgttcgccttgtgagctggttcgcgccatcatctcccgccactacccaa
aacctctacgtggaacgcccttctgatggttggttccgaatcacaaaccccgggcacatc
aaatcccacaccttcgaagctgggatgcgtcgaatccaggtacttgaaaaacgagaggcc
gaaaggaaagcccgccgagccaaacgccaggaacgtcgtgctaaacgagcacgagcacgc
attaaagggaaagggaaggctcgggacatcaagatctggatgttggtgactgaagacgaa
tggtacgcaccggaacgtctccgctctcccaattcgatcgccaagcatgctctgcaacga
tccggaagtcgtgatatggcagccttggtttttgttgcaattgtcagagctttaggaatt
cctgctagacttgtctcaagtttacaatgtgtcccatgggctttgccaaaggactatgcg
agcaaagctcgtaaacctaaggacaagacaacagtgacgtcgaagcgggatgatcaagac
actgccgttgatgaagatgcaatgcccggagtttcctccagggtaggctcaccaaacagt
accggagcaaatagcgtattgtctgccaccgcataccatacggataggtccgccgatcac
agcgataaccccacacgcctcaagccatcgatcaaacgaaaacgaggaccaggtaccgga
aataaccctatatccatgattgaaggcaatcaggctcctacactctgggctgaggtgttc
tctcgtcctgacggtcgttggatcccagtggatccggtacgtgggtttgtcaatcgagca
ggtttattcgaacggcgggaccaagccgggaagcgaaaggctgaaaaactgatgtacgtg
gtagcgatggaagaagacggctacgcccgtgatgtgaccgcgcggtacgcaaagaacttt
ggagctcatcaagccagagcaagagcacggatcgccgcaggacgaaagaatggaaaagtc
gaatggtgggattccgtcatgcgtgtcctgaaaagaccatatgctctgcaccgcgacgat
gttgaagatgcggaattatcccatcagagagctctagaaggtctgccaagttctattagc
gcatttaaggatcatccgatatacgccttggagagacaccttcgcagagatgaagctatc
cacccacgaactgaaatagcccatttccggggcgaacccgtgttcccgcgtcgaaatgtg
ctttctctgaagccggcagaggggtggatgcgccaaggaagggtgttacgctcaggcatg
caaccgatcaagatggtgaaagcgcgtgcaagcaccatacgcaaaaaaagagagctggaa
gttcgtcgcgaagacgagggtgaggtcatggtaggcatgtatgcagaatggcagacggag
ctctataaatctcccccagttatcgacggcaagatcccaacaaatgactttgggaatatc
gatctttatgtaccgacaatgcttccggaaggtgctgttcatatcccgcaaaaaggttgt
gcaaaggttgcgcgaaagctgggtatcaatttcgccgaggctgtaaccggtttcgagttc
cgcaatcgccaggcaactccgattatcacaggaatcgttattgcagcggggaacgaacaa
gtgtttttagaggctttagcttcccacatacgattggagcaggcaaaagaggccaccaaa
cgccgcgaacgagttttacagcgttggacacggctcgtacagggacttaggattgttcag
agggtcaatgagcaatactcaggagataatcgcccgggcatcgatgagaacgcgtccgca
gatggaacctggagctttttggatgatctgaaagacgtggtcaggccgtataatctaccg
caagcacagcccatcgtccccaagctgataaccgaggaagaagataggggagtctcagag
ctcatgatgcctcaagaacttttgcatggcatgcctgattcgccatctcgttatacatgg
tcagcgctaatggaggatgatgaacgccacgacgaacatgctgaacttgaatctcctacc
gaactcatgagtcgcgataccactaatatggaaccgccattgactatgcaagagctcgcc
gacaaactctccagagcaagggaacaaggaaactcagagcccacaaatggcgaaaccgag
gtaatacctgacgcaactactccacccctgccagaaatggaatcagatcgtcacgtcacc
aaagccagcccagaggataacgatgccaagcccaaccctatagacaatcgatccgaggct
aatcaaaataacacaggcaaaaccacccgccaattgcgcaggtcatcgcgtcggcacaat
gctctatctacgaccccggccccggccacgccgacccccacgcgcacgctgaggccgcgc
cggaaaccctga
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