KEGG   Rhizoctonia solani: RhiXN_01703
Entry
RhiXN_01703       CDS       T09256                                 
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
rsx  Rhizoctonia solani
Pathway
rsx03440  Homologous recombination
rsx03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RhiXN_01703
   03450 Non-homologous end-joining
    RhiXN_01703
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsx03032]
    RhiXN_01703
   03400 DNA repair and recombination proteins [BR:rsx03400]
    RhiXN_01703
DNA replication proteins [BR:rsx03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    RhiXN_01703
DNA repair and recombination proteins [BR:rsx03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     RhiXN_01703
    BRCA1-C complex
     RhiXN_01703
   NHEJ (non-homologous end-joining)
    MRX complex
     RhiXN_01703
SSDB
Motif
Pfam: SbcC_Walker_B AAA_21 TruB_C_2
Other DBs
NCBI-GeneID: 67023985
NCBI-ProteinID: XP_043187345
UniProt: A0A8H8P964
LinkDB
Position
16:complement(join(1459903..1459960,1460008..1460312,1460368..1460444,1460498..1460583,1460633..1460685,1460739..1460861,1460914..1461216,1461356..1461460,1461525..1461726,1461782..1461987,1462040..1462166,1462220..1462251,1462312..1462441,1462493..1462592,1462646..1462773,1462821..1462910,1462962..1463275,1463333..1463665,1463750..1463928,1463978..1464200,1464254..1464460,1464590..1464778))
AA seq 1189 aa
MVFQKDGKREEVKAQVKLRFFAANRTRMLAVRNLAVTVTKAKMTMKTLEGILATSDGAKD
NNKKMSSFVIKKIVTGHLRKLRFSKKFDDIFEATRYTKALDNIKSLRKERVADLKDKERL
HSLGLEKAHADRLKSKIDELTNQVAEKTQESEEQRLAWTSSCGYTKFYDSATRFQQIFLK
VEHLEERRSQVILNMEELKKTVTLVDDPTDVLKSKVDNYDAHCANQRTKRATKATELLQE
EDSLAEARQDHQEAVNMCGEMRGQAKNHEQNIIQRDTEINNIGTKYGIRPNTSANGSLDR
DSVVEFNARLGEMARAQALELERLQVYIPRSVSCDILTAQPCRMNTRLKVTNTKAENRAA
NRRNALKHEKETLKTQMQRNRSQISTAETSLDTLRLLETELKLAASAVLDAYDRLSAAKA
AAQESSFESQIAERTNALGIKTDERERLQQKLADLQSQAETRAKLGLKRADFSRKQAEID
TIIGIHNERFKAILGTDAEADTMERDVDQALIIKDKEIARLEADASAASREMHSVESALT
SYREQIRKKEAELKALEQRIKSGLADSEHSTVGPAIKAAQAELDNWLEEIGQHEGAGHFY
SKILKDGKTHKKCVICNRKMDEDQLIEFEKTVGGHIQKRDTKLQALLPVEETRDKLRDEE
LPTMQIRAEELDSKTAKATAEAQETETAVKAVKSFRKNCSLSKAKQVSSHEPSRRFKSLQ
REIQQHERDLAATGSTQTAEEVQAEIDQCGAHIKTLDRERTSLMAERDRQYQTLRTLENE
YSSRQLEESELKNRMKDQDSITKEIETLTKDNLEASARLKAIDGKLAGAQQPLQRLEQEQ
KRFQSEHNSTISLVLDRALRQCETRVSEAAISIAELEQSVQELREELAEIDREIHEAGAT
LAKFRDNLSLRKMKQDIENIQTEIAQHDLEQAGAAKAQFDERYQIEKDKENKLRSKQARL
AGELGILKSQLKSSKQELASQFQGINEKYTKQLVQVKMADMANNDLEKYAKALDNAIMKY
HALKMEEVNDTMRHLWNKTYQGTDIDGIKIVSDPDGGGAGTKKASYNYRVVMMKDQVEMD
MRGRCSAGQKMLASIIIRLALSDSFGQNCGILALDEPTNALDTENIDALASSLVDIINER
RHLSNFQLIIITHDESFLRKLGQAEVMEYYWRVSRDSRQKSVIERQRFN
NT seq 3570 nt   +upstreamnt  +downstreamnt
atggtgttccaaaaagatggcaaacgagaagaagtcaaggcacaggttaagttacggttt
ttcgctgctaatcggactcgcatgctggccgtccgtaatctggctgttacggtgaccaaa
gcaaaaatgaccatgaaaactcttgaaggaatattagcaacgtcagatggtgctaaagac
aataataagaaaatgtcatcttttgtcatcaagaagatagttactggccacttgcggaag
cttcggttctcaaaaaaattcgacgatatttttgaagctacacgatacaccaaagctctt
gataacatcaaatcgctgaggaaggagcgggttgcagatctaaaagacaaagaacggttg
catagtttgggtctggagaaggcacacgctgataggctcaaatctaagatagacgaactt
actaaccaggttgcagagaagactcaggagtcagaggaacagaggctggcttggacctca
agttgcggctacacgaagttctatgactccgctactcggttccagcaaatatttctaaaa
gtggagcatttggaagagcgccgatcccaggttatcctgaacatggaggaattgaagaaa
acggtgacgcttgtagatgacccaacggatgtgttgaagtccaaagtggacaattatgac
gcccattgcgccaaccagcggaccaaacgagccactaaagccaccgaattgcttcaggaa
gaggatagcctcgccgaggctcgtcaagatcaccaagaagcagttaatatgtgtggtgaa
atgcggggacaggcaaaaaaccacgaacaaaacattattcaaagagatacagaaatcaac
aatattggcaccaaatatgggattcggcccaatacaagcgccaacggatctctggataga
gattcggttgtagagttcaatgccagactgggagagatggctcgagcacaggcacttgag
ctggagcgtttacaggtatatatcccgcgctcagtttcctgcgatatattaactgctcaa
ccctgcagaatgaatacgaggttaaaagtaacgaataccaaagcagaaaacagagctgca
aaccgaagaaatgctctaaagcatgaaaaggaaactctgaagacgcaaatgcaacggaac
cgtagtcagatatccaccgctgagacgtcgcttgacacccttcgactgctcgaaaccgag
ttgaaactagcagcaagtgccgtactagatgcatacgaccgattgtcagctgcaaaagct
gccgcccaggaatcttcatttgaatctcaaattgcggagcgcactaatgccctcggaata
aagaccgacgaacgtgagcgtcttcagcaaaagttagctgacctacaaagccaggccgag
acgagggctaagcttggattaaaacgggccgatttctcgcgcaagcaagctgaaattgat
accattatcggtatccataatgaacgcttcaaggctattctagggaccgatgcagaagct
gacaccatggaacgggacgtagatcaagccttgattatcaaggataaagaaatagctcgc
cttgaggccgatgccagtgcagccagtcgcgaaatgcactcggtagagtctgccctcaca
tcgtacagagaacaaatacgcaagaaagaggcagaactcaaagcgctggagcaacgcata
aagtctggcctagcagactctgaacactcgactgttggccctgcgatcaaggcggctcag
gcagagcttgacaactggctcgaagagataggtcagcatgaaggcgcaggtcatttctac
tccaaaatcctcaaggatgggaaaactcacaaaaaatgtgttatttgcaaccgcaagatg
gatgaggatcaacttattgagtttgaaaaaactgttggtggccatattcaaaagcgcgac
actaaactgcaggcgcttttgcctgtggaggagactcgggacaaattgcgagatgaagaa
ttacccacaatgcaaatacgcgcagaagaactcgattcaaagacagccaaggcgacggcg
gaggcacaggagaccgaaactgcggtgaaagccgtcaagtcattcagaaagaactgcagt
ctctcaaaagccaagcaggtttcatcacacgaacccagcaggaggttcaagtccctgcaa
cgtgaaattcagcagcacgagcgggatctagcagccacaggatctacacaaaccgctgaa
gaagtacaagctgaaatcgatcaatgcggggcacacatcaaaactctagaccgtgaacgg
acatccctgatggctgaacgagaccgacagtatcaaacactacgaaccctcgaaaacgag
tattcctcaaggcagcttgaagaaagcgagttaaagaatagaatgaaagaccaggactcg
atcaccaaggaaattgaaacgcttaccaaagataatctagaggccagtgccaggctcaag
gcaatagacggtaaattggccggagcacagcaacctctacagagactagaacaggagcag
aaaaggtttcagtctgagcataattcaacaatctcattggttctcgaccgtgcgttaaga
caatgcgaaacccgagtttccgaagctgctattagcatcgctgagctcgagcagtcggta
caggaactccgcgaggaattagcagagatagacagggaaatacatgaagcgggggccaca
ctcgccaaatttcgagataacttgagtttgaggaagatgaaacaggatatcgagaacata
caaacagagatcgcccaacacgacttggagcaggccggagctgccaaggcgcaatttgac
gagagatatcaaatcgagaaggacaaggagaataaattacgatcgaaacaagcgcggttg
gccggagaacttgggatactgaagagccagctcaagagttctaaacaagaacttgccagt
caattccaaggcattaacgaaaagtataccaagcagctggttcaagtcaagatggccgat
atggcgaacaacgacttggaaaagtatgctaaagcattggataatgctatcatgaaatac
catgcgttgaagatggaagaggttaacgacaccatgcgtcatctttggaacaagacctac
caaggcactgatattgatggaattaaaatcgtctcggatcctgacggtggtggcgctgga
actaaaaaagcatcatacaattatcgggtagtgatgatgaaagaccaagttgagatggac
atgcgtggccgctgtagcgctggccagaagatgcttgcttccattatcatccggctggcc
ctgtctgattcatttggccagaactgcggtatccttgctcttgatgagccgaccaacgct
cttgatactgaaaatattgatgcccttgcaagcagcttggtagacattatcaacgagcga
aggcacttaagtaacttccagcttatcatcatcacccacgacgagagcttcttgcggaaa
ttgggacaggccgaagtgatggagtattattggcgtgtatcacgagacagtcgacagaaa
tccgtaattgagaggcaacgattcaactga

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