Rhizoctonia solani: RhiXN_01744
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Entry
RhiXN_01744 CDS
T09256
Name
(RefSeq) DEAD/DEAH box helicase
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
rsx
Rhizoctonia solani
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsx03009
]
RhiXN_01744
Enzymes [BR:
rsx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RhiXN_01744
Ribosome biogenesis [BR:
rsx03009
]
Eukaryotic type
90S particles
Helicases
RhiXN_01744
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Utp25_C
HEM4
Motif
Other DBs
NCBI-GeneID:
67024026
NCBI-ProteinID:
XP_043187386
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All DBs
Position
16:join(1583780..1583845,1583915..1584122,1584171..1584352,1584405..1584684,1584735..1584801,1584850..1585044,1585097..1585461,1585514..1585589,1585649..1585910)
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AA seq
566 aa
AA seq
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MEAFRLLSRGGAKFDKGRFRNDATNGESSKGVRSTTQELAPGQLPPELDFFKYAKAAPNG
PASAPTSMKPPKSEESESSPGKKRKRSDEDHKESLPKHRVTSSGDGVPSPISEFEDLSSR
YKIPQRLLQNIENCGYDSPTGIQAHGIPVLLEGRHLIAISPTGTGKTMSYLLPIFSLLQS
PVSSKSPPENAGKGARAVIVSPTRELAAQIYNECLKLADGRKWRIILYGKATGSTLAQPE
VRDKVDIVVTTPLRLVDSLQKSLINLDNVRCLVLDEADRLLEGEFFSQTEEIVQSCTHPN
LQKAVFSATLPAGAEAIANGYLDSPVRIVVGLKDSATSSVKQKLTFVGTESGKLLTLRQH
LAAGFQPPVLIFVQSQERAQELSEELLYDGRNVDVLHSGRTKKQRSDAAERFQRGECHIL
VATEVMARGMDFAGVRLVINYDFPQSVQSYIHRIGRTGRAGREGEAVTYFTNVDAPYLKM
IANVLKASNNPVPEWMLKLPKPSKMKRRALKRKPVARKDVGVVAGRAVGKGEAIRRREMI
AASKRRKMGENRPDSEERNSDEAGNL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggaggctttcaggttgttgtctcgtggaggagcaaaatttgacaagggtcggtttcgc
aatgatgcaacgaacggcgaaagtagcaagggcgtaagatctactactcaggaacttgca
ccaggacaactgccgcccgagctggatttcttcaaatatgccaaggccgcccccaatggg
cctgcatcggcccctacgtctatgaagccacccaaatcagaagagtcagaatcatcgcca
ggtaaaaagcgtaagcgtagtgacgaggatcataaggaatcgcttcctaagcaccgtgtg
acttcatccggggatggtgtgccttctccaatatcagaattcgaggatctgtcctcaagg
tataaaattcctcaacggctgttacagaatatcgagaactgtggttatgattcgcccact
ggcattcaggcccacggaatccctgtgttgctagaaggaagacacctcattgctatatct
ccaaccggtaccggaaagacaatgtcatatctactccctatattcagccttctccaatca
ccagtatcatcgaaatcccccccggaaaatgctggaaagggggcaagagcggtaatagtt
agtcctacacgggagctcgctgcacaaatctacaatgaatgccttaaacttgccgatggg
cggaaatggaggattattttgtatggaaaggctacggggtcaactctcgctcagcccgag
gtaagagataaagttgacatcgtggtcacaaccccgttgagattggtcgattcattacaa
aaatctttaattaatttggacaatgttcggtgtttggttcttgatgaagcggaccgactt
ttagaaggagagttcttctcccagacagaagaaattgtgcaatcttgcacgcacccgaac
cttcaaaaggccgtatttagcgccacattaccagcgggggccgaggcaatcgcaaatggc
tacctagattctcccgtacgcatagttgttggtctcaaagactcggcgacatcctcagtt
aaacaaaaactaacttttgtcggaactgaatccggaaaacttcttacgcttcgacagcat
ctcgcagccgggtttcaacctccggtgcttatattcgtccaatcccaagaacgtgcacag
gagttaagtgaggaactgctatacgatgggcggaacgtggatgttttgcattcgggaagg
acaaagaaacaacgctcggacgcagccgagagattccaacgcggagaatgccacatcttg
gttgcaaccgaggttatggctcgtgggatggattttgcgggcgtaagactggtaatcaat
tacgatttcccgcaatcggttcagagctacattcacagaattggtcgtaccgggcgtgct
gggagagaaggtgaagccgtgacatactttacaaacgtagatgcgccgtatctcaaaatg
attgccaatgttttgaaggcatctaacaatcctgtgccggagtggatgctcaagttaccg
aagccgtccaagatgaaacgacgcgcattgaaacgaaaacctgttgcacgtaaagacgtg
ggtgtagttgcggggcgagcagtgggtaaaggagaggcaattcgtaggagggaaatgatt
gcggcaagcaaacgacgaaagatgggcgaaaataggcctgattcggaagagaggaattcc
gatgaagccggcaacttataa
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