Rhizoctonia solani: RhiXN_01803
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Entry
RhiXN_01803 CDS
T09256
Name
(RefSeq) TFIID and SAGA subunit
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
rsx
Rhizoctonia solani
Pathway
rsx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RhiXN_01803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsx03021
]
RhiXN_01803
03036 Chromosome and associated proteins [BR:
rsx03036
]
RhiXN_01803
Transcription machinery [BR:
rsx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
RhiXN_01803
Coactivators
SAGA/TFTC/STAGA complex
RhiXN_01803
Chromosome and associated proteins [BR:
rsx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
RhiXN_01803
STAGA complex
RhiXN_01803
TFTC complex
RhiXN_01803
SAGA complex
RhiXN_01803
SLIK complex
RhiXN_01803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_SCAP
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_VPS8
RMC1_N
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
67024085
NCBI-ProteinID:
XP_043187445
LinkDB
All DBs
Position
16:join(1773476..1773889,1773942..1774020,1774075..1774374,1774428..1774914,1774963..1775102,1775158..1775498,1775560..1775728,1775793..1776030,1776243..1776354)
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AA seq
759 aa
AA seq
DB search
MAEADSSIDTSPSDAQPSSALPNGSNTGLHPTSPTTPRLNTQQVLEYLRQRGFKRAEQAL
LEDTGKTQNLDELVKQNLPEESTAPVKIDPEQAGKDAAVIAALRSRGRDEAVVLDPAERA
EAFRQLESWVDGSLDIYRHEFRPLLFPVYCHFYLDLVSDGYKTLAIQFAKQHSPSLASQH
QTTIHHLSTLLLPAHVKSDELATRFRTEKYVVRMTRSGFGLLLGWLTEGVGGEAPGAGEG
FGGDRSRRARMAVMHVINAHLQFDLTTAAATSVSPLTLEESTGLISSLIPTPPNADGAAS
RTSAFHMAQNPLKLGPAPLSQPLQEETERILSEEGVQQRPVTSVPGLVSPAQGDLLPQPP
TFRMADVKREVEKVRDARKRIRLDPNVLGPDSGEAVGIGGVERFSAAQRSGALPSVCAFT
VHDAMDGMTCAGFSQDSTLMSVGFSESYIRLWNLKGEKLRGMRSDFQVTGVKDASSLKRL
REKQGTSTRKLIAHSGPVYTTAFDIASPTPRFLLSCSADTTTRLWSLDTLTNVSVYRGHQ
APVWDVQWAGVSGGWFATGSRDRTARLWSTERTSPLRVYAGHLSDVDCVRFHPNGLYLAT
GSTDWTCRLWDVQKGSCVRVFIGHQGAVTSMAMSPDGRYLASAAEDLSINLWDLSSGKRI
KKMTGHTGAIHSLTFSAESNVLVSGGGDWTVRVWDVRHAGGLGAGADIGVGGKDDSKEEV
VKSADLLVTYATKRTPAMHVQFTPRNLCLMAGPYVPESL
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcagatagttcgatagatacatctccatccgatgcccagccatcctccgcg
ttaccgaatggaagcaacacaggcctacatcctactagcccgacgacgcctcgcctgaat
acccagcaagtgcttgaatacctccgccagcgtggattcaaacgagcggagcaagcgttg
ttggaagatactggaaagacacagaacttagatgagctcgtgaaacagaacctcccagaa
gagagtactgcgcctgttaaaattgatcccgaacaagccggaaaggatgcggcagtcatt
gcagccctccgttcgcgaggacgggatgaagctgttgtcttggatcctgcagagcgtgca
gaggcctttagacaactggagtcttgggtagatggatcattggatatttataggcatgaa
ttccgacctctactcttccctgtgtattgtcatttctatttagacctggtctcagatgga
tataaaacccttgctattcaattcgcaaaacagcactctccctctctcgcatcgcaacac
caaacaaccattcaccatttgtctacactccttttaccagcacatgtcaaatctgatgag
ctcgctactcgttttcgaactgaaaaatatgttgtacggatgacgcggtcgggtttcgga
cttttgctgggatggttgactgagggagtgggcggagaggcaccaggcgcgggcgaggga
ttcggaggagataggagtaggagggcacgtatggcagtaatgcacgttatcaacgcgcat
ctacagtttgatttaaccactgccgctgcaacgtctgtctctcccctcacccttgaagaa
tctactggattaatctcttcactgattcctacccctccaaatgccgatggagctgcatcc
cggacctcagcctttcatatggcacaaaacccacttaaactcggccctgcgccactttct
caacctcttcaagaggaaactgagcgtattcttagtgaagaaggggttcaacagcgccct
gtaactagtgtccctggtcttgtttctccggcccaaggagatttattaccacaaccccca
acattccgaatggcagacgtgaagcgcgaggtagaaaaagtcagagacgcgagaaagagg
atacgattagatccaaatgtgcttggacctgattctggtgaagctgtggggattggcgga
gttgagaggttttcggctgcgcaacgaagcggtgctttgccaagtgtgtgtgcatttacg
gtacacgatgcaatggatggaatgacttgtgctggtttctcgcaagattcaacgcttatg
tccgtcggattttcagaaagctatatcaggttatggaatctcaaaggggagaagctgaga
ggaatgagaagtgactttcaggtcacaggcgtgaaagatgcgtcttctcttaagcgtctc
cgggaaaagcagggtacatccactcgcaaactcatcgctcattctggtccagtctacacc
acagccttcgatattgcttctcctacaccgcgcttccttctgtcctgctctgccgacaca
acaacgcgcctctggtcacttgacacactcacgaatgtgtcggtgtatcgcggacaccaa
gcgcctgtgtgggatgttcaatgggctggagtttcgggaggatggtttgcaactggctcg
agagacaggacagctaggttatggagtaccgagaggacctcaccgttaagggtctatgca
ggtcacctaagcgatgttgattgtgtgcgtttccaccccaatggcctttatcttgctaca
ggttccactgattggacatgtcggctctgggatgtgcaaaagggttcatgcgtgagggtt
ttcataggacaccagggagctgttacaagcatggcaatgagcccagatggtcgatacctc
gcgagtgcagccgaggacctatcgattaacctctgggatctttcttctggtaaacgaatc
aaaaagatgacagggcatacgggagcaatacactcgctcacgttcagtgccgagtcgaat
gtgctggtatctggaggtggcgattggactgtacgagtttgggatgtccgacacgctggt
ggcttgggtgcaggcgccgatattggggtgggtggcaaagatgattcaaaggaggaggtt
gtgaagagtgcagatctattggtcacatacgcaacaaagcggacgcctgctatgcacgtc
cagtttactcctcgaaatctttgtttgatggctggcccctatgttcccgagtctttatga
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integrated database retrieval system
