Rhizoctonia solani: RhiXN_01863
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Entry
RhiXN_01863 CDS
T09256
Name
(RefSeq) RNA recognition motif protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
rsx
Rhizoctonia solani
Pathway
rsx03013
Nucleocytoplasmic transport
rsx03015
mRNA surveillance pathway
rsx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
RhiXN_01863
09122 Translation
03013 Nucleocytoplasmic transport
RhiXN_01863
03015 mRNA surveillance pathway
RhiXN_01863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsx03019
]
RhiXN_01863
03041 Spliceosome [BR:
rsx03041
]
RhiXN_01863
Messenger RNA biogenesis [BR:
rsx03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
RhiXN_01863
Spliceosome [BR:
rsx03041
]
Common components
Common spliceosomal components
Cap binding complex
RhiXN_01863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
67024145
NCBI-ProteinID:
XP_043187505
LinkDB
All DBs
Position
16:complement(join(1941985..1942038,1942095..1942150,1942209..1942341,1942403..1942568,1942626..1942747,1942808..1942858,1942911..1942970))
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AA seq
213 aa
AA seq
DB search
MAQVVNPLDQASTYRDSQSRLDAQKTQELLDRSSTLYVGNLSFYTTEEQIYDLFQKCASP
EDGGGVKRIIMGLDRNTRTPCGFCFVEYYTHAEATAAVRYISGTKLDERIVRCDLDLGYR
EGRQYGRGKSGGQVRDELRQDYDAGRGGWGAQAQRERREVVYEHQTSTAGGGGEWKHAND
NPYKRQREDDDEMEPNPQRMRENDDVDTRSGES
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggtagttaacccattggatcaggcctcaacttacagggattcccagtcacgg
ctcgacgcgcaaaagacacaggaactgttggatcgaagctcaacactttatgtcgggaat
ctttcgttctacaccaccgaagaacaaatatacgacctctttcaaaaatgcgcttctccg
gaggacggaggaggagtgaagcgaatcatcatgggattggaccggaatacacgaacaccc
tgtggattctgtttcgttgaatactatacgcatgcggaagccacggctgcggtacgttat
atatctgggaccaagctggacgagagaattgtccgatgcgatttggacttgggataccgg
gaaggaaggcagtacggtagagggaagagcggtggtcaggtccgagatgaattgcgtcag
gattatgacgccgggcgtggcggatggggtgcccaagcacaacgagagcgccgcgaagtg
gtgtacgaacaccagaccagtactgctggtggaggcggtgaatggaagcacgcaaacgac
aatccttacaaacgtcagcgcgaggatgatgatgaaatggaaccaaatcctcagcgcatg
cgagagaacgatgatgtggatacgagatccggggaatcatag
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