KEGG   Rhizoctonia solani: RhiXN_01944
Entry
RhiXN_01944       CDS       T09256                                 
Name
(RefSeq) pre-mRNA-splicing factor CEF1
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
rsx  Rhizoctonia solani
Pathway
rsx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    RhiXN_01944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsx03041]
    RhiXN_01944
   03400 DNA repair and recombination proteins [BR:rsx03400]
    RhiXN_01944
Spliceosome [BR:rsx03041]
 Complex B
  Other components
   Prp19 complex
    RhiXN_01944
 Complex C
   Prp19-CDC5 complex
    RhiXN_01944
DNA repair and recombination proteins [BR:rsx03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    RhiXN_01944
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 XRCC4_CC TPR_HPS5_insect
Other DBs
NCBI-GeneID: 67024226
NCBI-ProteinID: XP_043187586
UniProt: A0A8H8P885
LinkDB
Position
16:complement(join(2162578..2162777,2162807..2163705,2163747..2163954,2164007..2164466,2164518..2164551,2164607..2164754,2164810..2165089,2165155..2165257,2165310..2165365,2165421..2165431,2165512..2165545,2165621..2165653))
AA seq 821 aa
MKWKAGFEEPWPQRTSTHSLGHGVWKNTEDEVLKAAIAKYGKNQWARISSLLVRKTPKQC
KARWYEWLDPSIKKTEWSKTEDEKLLHLAKLMPTQWRTIAPIVGRTATQCLERYQKLLDD
AEAKENEELGLGGPGDEAGPSADDVRRLRPGEIDPDPETKPARPDPIDMDEDEKEMLSEA
RARLANTQGKKAKRKARERQLEEARRLAVLQKKRELKAAGIIMRHKTKKKGMDYNADIPF
EKKPVPGFYDTSEEQAKSYSAPVGQSLRRLENKRKPQDEESEAKKRQKKGKENEPHSTKF
IAARDAQIQKLKEAEQISKRRALVLPAAQVGEAELEEIVKIGQAGQSARALMNDEGEGNE
ASGQLLGEYEGLSHARMARTPRTAPQEDNIMAEARNLRNMVQAQTPLLGEENTPMRGPAE
GGTGFESATPRHQVAFTPNPLATPRANGDGSGLPHDINPEDGIMVGDTPREERLRAAAAQ
RSLKLGFASLPKPSNDFEVVLPEDEEEAEDEDEQTMTVEDMAERNARMRKLQEEEERKAL
ERRSSVVKKDLPRPVHIDHERLSRALRETPRPRDALSEAHKLIDNELVDLIQHDTIAHPL
PGTPYPGGTPSMYDIPEDDDVAAAALAVHIELSATLGIVGATPEEVRKGVILAAGQEDID
GEALSWARMRDTWAYDKNLKAWVDSSSLSPEDRVAGIAALIMQDRDSMSKEAAKAAKVEK
KLNVTLGGYNARSGILAKRVKGAWAELQKATIELETAAPRRVEALKEEVERLERQERELQ
ARFQDLSIAKEEVQGSIAAKEEQIMAEAEALNEAALAAAEA
NT seq 2466 nt   +upstreamnt  +downstreamnt
atgaaatggaaggccgggtttgaagagccttggccacaacgaacgtccactcactcactt
ggccatggtgtctggaagaacactgaggatgaggtgttgaaagcggccattgcgaagtat
gggaagaatcaatgggcgcgtatttcgtctctgctcgtccgtaaaacgccgaagcaatgc
aaggctcgctggtacgagtggctggatccctccatcaaaaagaccgagtggtcaaagaca
gaggatgaaaagctgctgcacttggcaaaattgatgccaacgcaatggagaactattgca
ccaattgtcggacgtaccgctacgcaatgcttggagcgataccaaaaacttctggatgac
gcggaagcaaaagagaacgaggagcttggtttgggtggcccgggtgacgaagccgggccc
agcgccgatgatgttcgcaggcttcggcctggtgagattgaccccgacccagagacgaag
ccagcgcgaccggaccctattgacatggacgaggacgagaaggaaatgctgtcagaggct
cgcgctcgtctggccaatactcagggaaagaaggcgaagaggaaggcccgcgagagacag
cttgaggaggcacgaaggcttgctgttttgcagaagaagcgggaactcaaggctgctggt
atcatcatgaggcacaagacgaagaaaaagggaatggactacaatgccgatatcccattc
gaaaagaagcctgtgcccggtttctacgacacgtctgaagaacaagccaaatcctactca
gctcctgtcggccagtctcttcgtcgtctcgaaaacaagcgtaaaccacaggacgaagaa
tccgaggccaagaaacgccagaagaaggggaaggagaacgagccacactctaccaagttt
attgccgctcgcgatgcacaaatccaaaagctcaaggaggcggagcaaattagcaagcgg
cgtgctttggtgcttcccgcagcacaagtcggagaagccgagctcgaagagattgtcaaa
attggacaggctggccagagcgcgcgagctttgatgaatgatgaaggagaggggaatgaa
gcaagtgggcaattgcttggagaatacgaaggtcttagtcacgctcgtatggcgcgaacc
ccccggaccgccccccaagaggacaatattatggcggaagctcgaaacctacgaaacatg
gtgcaagcccagacccccttgttgggcgaagagaacactcccatgcgcggacccgcggag
ggcggtaccggcttcgagagcgccactccacgacaccaggtcgcatttactcctaatcct
ctcgccacgcctcgcgccaatggagacggttcggggctaccccacgatatcaatccggag
gatgggattatggttggtgataccccgcgagaggaacggttacgtgctgctgctgctcag
agatcgctgaaacttggctttgcaagccttcccaagccgagcaacgattttgaagttgtt
ctgcccgaggatgaagaagaggcagaggatgaggacgaacaaacgatgacagtcgaggat
atggccgagcgaaatgctaggatgaggaagctacaggaagaagaagagcggaaagctctg
gagcgccgttcaagcgttgtcaaaaaagacttgcctcggcctgtccacatcgatcacgag
cgactctcgcgagccctacgcgaaacaccacgaccacgcgacgctctctctgaagctcac
aaactcattgacaatgagttggtcgacctcatccagcatgacacaattgctcaccctctc
cccggaacgccgtacccaggcggtaccccctctatgtatgatatacccgaggacgatgat
gtcgctgcagcggctctggcagtacatattgaactctcagctacccttggcatcgttggt
gcaacaccagaagaagtaaggaagggcgttattctggccgcgggccaggaggatatcgat
ggcgaagcgttgagctgggcccggatgcgtgatacatgggcttacgacaagaatttgaag
gcatgggttgattcttcgtcattgtcacccgaagaccgcgtggctgggatcgctgcgctc
attatgcaagaccgggattccatgtccaaggaggccgcaaaagcggcgaaggtcgaaaag
aagctcaatgtcacgcttgggggttataacgctcgttctggcatcttagctaaacgcgtc
aagggcgcatgggctgaacttcaaaaggcgaccatcgagctcgagactgctgctccacgc
cgagttgaggcgctcaaagaggaagttgagagactggagcgacaagaacgggagttgcag
gcccgtttccaggaccttagcatcgccaaggaagaagtacaaggtagcattgcggccaag
gaagagcagatcatggccgaagcggaggctttgaacgaggctgcactcgctgctgcagaa
gcctag

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