Rhizoctonia solani: RhiXN_02003
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Entry
RhiXN_02003 CDS
T09256
Name
(RefSeq) AAA family ATPase
KO
K10755
replication factor C subunit 2/4
Organism
rsx
Rhizoctonia solani
Pathway
rsx03030
DNA replication
rsx03410
Base excision repair
rsx03420
Nucleotide excision repair
rsx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RhiXN_02003
03410 Base excision repair
RhiXN_02003
03420 Nucleotide excision repair
RhiXN_02003
03430 Mismatch repair
RhiXN_02003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsx03032
]
RhiXN_02003
03036 Chromosome and associated proteins [BR:
rsx03036
]
RhiXN_02003
03400 DNA repair and recombination proteins [BR:
rsx03400
]
RhiXN_02003
DNA replication proteins [BR:
rsx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
RhiXN_02003
DNA Replication Termination Factors
ELG1-RFC complex
RhiXN_02003
Chromosome and associated proteins [BR:
rsx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
RhiXN_02003
DNA repair and recombination proteins [BR:
rsx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
RhiXN_02003
Check point factors
HRAD17(Rad24)-RFC complex
RhiXN_02003
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
Rad17
AAA_22
AAA_assoc_2
AAA_11
AAA_16
AAA_14
Mg_chelatase
RuvB_N
AAA_24
SLFN-g3_helicase
AAA_28
AAA_5
AAA_2
AAA_30
ResIII
AAA_19
AAA_7
DEAD
DNAX_ATPase_lid
DUF815
TIP49_C
Psu
Cdc6_lid
AAA_3
bpMoxR
Motif
Other DBs
NCBI-GeneID:
67024285
NCBI-ProteinID:
XP_043187645
UniProt:
A0A8H8P9R6
LinkDB
All DBs
Position
16:complement(join(2329881..2330042,2330096..2330175,2330225..2330444,2330494..2330614,2330669..2330935,2330991..2331070,2331123..2331201,2331254..2331333))
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AA seq
362 aa
AA seq
DB search
MFLKSSAKKDVQKNVVDPALQPWVEKYRPQTIEDVSAQEHAVAVLRKTLTSTNLPHMLFY
GPPGTGKTSTILALSRQLFGPELFRTRVLELNASDERGISIVREKIKNFARQTPRAAEAN
SKYPCPPYKIIILDEADSMTQDAQAALRRIMENYAKITRFCLVCNYVTRIIEPLASRCSK
FRFHPLDVSSTRSRLEHIVKLENIDISPEAVTALISTSDGDLRRSITYLQSAARLSASQE
PSPSISASDIQEIAGVVPDAVMNRFSSAVGIELPDEGMDIDRAKDIDGIRDEVNRIMQEG
FSVAQLLSQLHDIVILHNTVTSKQKTACAAVFAAADKALCDGADEELQLLEIGLGVWKAL
KS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgaaaagcagtgcgaagaaagatgtccaaaagaatgtggtagatccggcgctg
caaccatgggttgagaagtatcggcctcagacgattgaagatgtctctgcccaagaacat
gccgttgccgtactgaggaaaacgctgacatcgactaacttgccacatatgctgttctac
gggccacctggcactggaaaaacaagtaccatccttgccctatctcgacagctttttggt
ccagagcttttccggacgcgagtgttggagttgaacgcatcagatgagcgtggtatctca
atagtgcgagaaaaaatcaagaattttgcgcgacaaactccacgagcggccgaggccaat
tctaagtacccatgcccaccgtacaaaattatcatattggatgaagcagattcaatgact
caagatgcgcaggcagcgctacgtcgcattatggagaactacgctaagattactcgattt
tgtttggtttgcaactatgtaacgcgaattatcgaacctttggcatcacgttgttctaag
ttccggttccaccctcttgacgtgtcttcgactcgctcgcggctcgagcacatcgtaaaa
ttagaaaatattgatatttcaccagaggctgttaccgcactgatatcgacctcagatggg
gaccttcggcgatctattacttatttgcagtcagcagcacgcctatctgcatcacaggag
ccctcgccatctattagcgcttctgatattcaagaaattgctggggttgtgcccgacgcc
gtgatgaaccggttcagctctgcggttggcattgaattacccgatgaaggaatggatata
gatcgcgcgaaagacattgacggtatcagagacgaagtcaatcgaataatgcaagaggga
tttagcgttgcccaattactatcacagttacacgatattgttattttgcacaacactgta
acgtcgaaacaaaagacagcatgtgcagctgtgtttgcagctgcggacaaggcgctatgt
gatggggcggatgaggaactgcagctgcttgaaatcggtctcggtgtatggaaggcactt
aaatcatag
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