Rhizoctonia solani: RhiXN_02013
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Entry
RhiXN_02013 CDS
T09256
Name
(RefSeq) U4 small nuclear ribonucleo 27 kDa
KO
K12846
U4/U6.U5 tri-snRNP-associated protein 3
Organism
rsx
Rhizoctonia solani
Pathway
rsx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
RhiXN_02013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsx03041
]
RhiXN_02013
Spliceosome [BR:
rsx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
RhiXN_02013
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNRNP27
Motif
Other DBs
NCBI-GeneID:
67024295
NCBI-ProteinID:
XP_043187655
UniProt:
A0A8H8T4F6
LinkDB
All DBs
Position
16:complement(join(2352810..2352831,2352886..2352980,2353028..2353179,2353232..2353430,2353471..2353613,2353672..2353696))
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AA seq
211 aa
AA seq
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MSDRRGGQRTTTAGTRGIGEPEIAMVETTMAAANAGEAVLGVPDEVAAAREIEMEEFVTL
LITDRRTIPKDDDRREHRRDDRARHDDDRGPARRDDGRGSRDDRDKDRDSRQRKPGVEDS
SAKPPNGPPPPEPDAPPPRDSNVGGEIEEGEDMEEDEEDMMAAMGFGGFDSTKGKSVNGN
QQGAANVKKQRTWRQYMNRKGGFNRPLDKVK
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccgccgcggaggacagcggactacgaccgccgggacacgcgggattggcgaa
ccagagatcgcgatggtcgagacgactatggccgcagcgaacgcaggagaagccgttctc
ggagtcccagacgaggtggccgcagcgagagagatagagatggaagagtttgtgacgtta
ttgattacagacagacggacgatcccgaaggacgatgaccggcgggaacacaggcgagac
gaccgagccagacacgatgatgatcgtggcccagctcgaagggatgacggccgcggttct
cgtgacgacagggacaaggacagggattcacgccagcgaaaacctggtgtggaagattca
tcagcgaagccccccaacggtccacctccaccagagcctgatgctccaccgccacgagac
tcaaatgtagggggcgaaatcgaggaaggtgaagacatggaagaagacgaggaggacatg
atggctgccatgggctttggtggatttgacagcaccaaaggaaaatccgttaatgggaac
cagcaaggtgccgctaacgttaagaagcagaggacgtggcgtcaatacatgaaccggaag
ggaggcttcaacagacctttggacaaagtcaagtga
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