KEGG   Rhizoctonia solani: RhiXN_02116
Entry
RhiXN_02116       CDS       T09256                                 
Name
(RefSeq) CCR4-Not complex component, Not1
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
rsx  Rhizoctonia solani
Pathway
rsx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RhiXN_02116
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsx03019]
    RhiXN_02116
Messenger RNA biogenesis [BR:rsx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     RhiXN_02116
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     RhiXN_02116
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 67024398
NCBI-ProteinID: XP_043187758
UniProt: A0A8H8T2I1
LinkDB
Position
16:join(2635102..2635220,2635282..2635449,2635508..2635586,2635673..2635735,2635792..2635907,2635962..2636143,2636198..2636334)
AA seq 287 aa
MRCNVDLLKIIQIGITLSDANGNMPDGTCTWQFNFHFSVNDDMYSADSIENLQKAGLDFS
RHEDPQYGIKPNDFAELLITSGLVIFENVKWISFHSGYDFGYLLRLLTNAPLPSVEEDFF
ELFITRSIRATKGGLQEIADELGVQRIGPLQQAGSDALLTSMTFFKMKEHYFPDQFDESK
YSGQLYGLGPNYNPLASSPSAPTPAHVHHTAVSHNMNISLPGMGMQMNGMNSMGMGQPFP
TPGLYPTGSVGTPFGPSGPTPPTHGGGMSGMGMGGVGMYGMPGHNVR
NT seq 864 nt   +upstreamnt  +downstreamnt
atgcgctgtaacgtcgatttgctcaaaattatccaaattggaatcacactctccgacgcc
aacggaaacatgcctgatggcacatgcacatggcaattcaacttccactttagcgtcaat
gatgacatgtattcagcagactctattgaaaacttacaaaaagctggacttgactttagt
cgacacgaagatccccaatacggtatcaagcccaatgattttgctgagctcttaatcacc
agcggcttggtaatatttgagaatgtaaaatggatcagcttccatagtggttatgacttt
ggatatctcctccggctcctaacaaatgcgccactaccttcagtcgaggaagatttcttc
gagctctttatcacgaggagcattcgcgccaccaaaggaggactccaggagatagccgac
gaactcggagttcaaagaatagggccattgcagcaagctggttctgacgctttgcttacg
tctatgactttcttcaaaatgaaagagcattatttccctgaccaattcgacgaatcaaaa
tacagcggtcagctgtatggcctcggtcctaactacaacccactggcatcgtccccctct
gccccgaccccggcccacgtgcaccacactgctgtatcccataacatgaatatatctctt
cccggaatgggcatgcagatgaatggcatgaactcgatgggaatggggcaacctttcccc
acacctggtttgtatcccacaggatctgtaggtacaccttttggtccctcagggcccact
ccgcccactcatggaggaggtatgagcggaatgggcatggggggcgtagggatgtatgga
atgccgggacataacgtccgatga

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