Rhizoctonia solani: RhiXN_02122
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Entry
RhiXN_02122 CDS
T09256
Name
(RefSeq) U1 small nuclear ribonucleoprotein C
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
rsx
Rhizoctonia solani
Pathway
rsx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
RhiXN_02122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsx03041
]
RhiXN_02122
Spliceosome [BR:
rsx03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
RhiXN_02122
Complex B
RhiXN_02122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
67024404
NCBI-ProteinID:
XP_043187764
LinkDB
All DBs
Position
16:complement(join(2645031..2645059,2645113..2645304,2645373..2645396,2645447..2645521,2645579..2645746,2645800..2645859,2645914..2645971))
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AA seq
201 aa
AA seq
DB search
MPKHYCDYCDVFLTHDSTSVRKAHNSGRNHLANVQDYYASLGHDKAQNIIDQITSAYESG
GGPPRGGFNFGPNAFAPPPPNFGGPGFGPPPMGFGGPPPGGFPPFPPGSFPGGPPPMGMR
GPGAPPMGAPPFPPNGAPPFPPNGAPPFPPNGAPPFPPNGAPPFPPNGAPPFPPNGPGGP
GGPPSGPPGVHPDRMRMMGGR
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacactattgtgactactgcgatgtgtttctgacccatgactctacatccgtg
cgcaaagctcacaacagcggaaggaaccacctggcgaacgtccaggattattatgcatcg
ctaggacacgacaaggcgcaaaatattatcgaccagattacttcggcctacgaatccggt
ggaggacctccccgtggtggcttcaatttcggacccaatgcgtttgctcctccaccacca
aactttggtgggcctggattcggccccccacctatgggattcggaggaccaccacctggc
ggatttccccctttccctcctggcagtttccccggaggacctcctcctatgggtatgaga
gggcctggagcaccacctatgggtgcaccacccttccctcccaacggagctcctcccttc
ccacctaacggcgcgcccccattcccaccaaacggtgctccacctttcccgcctaatggt
gctccgcctttccctccaaacggcgcacctcctttccctcccaatggccctggaggtcct
ggaggccctccatccggtcctccgggtgttcacccagaccgcatgcgaatgatgggaggc
cgatga
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