KEGG   Rhizoctonia solani: RhiXN_02186
Entry
RhiXN_02186       CDS       T09256                                 
Name
(RefSeq) DNA topoisomerase 1
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
rsx  Rhizoctonia solani
Pathway
rsx03440  Homologous recombination
rsx03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RhiXN_02186
   03460 Fanconi anemia pathway
    RhiXN_02186
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsx03032]
    RhiXN_02186
   03400 DNA repair and recombination proteins [BR:rsx03400]
    RhiXN_02186
Enzymes [BR:rsx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     RhiXN_02186
DNA replication proteins [BR:rsx03032]
 Eukaryotic type
  DNA Topoisomerases
   RhiXN_02186
DNA repair and recombination proteins [BR:rsx03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     RhiXN_02186
   FA (Fanconi anemia) pathway
     RhiXN_02186
SSDB
Motif
Pfam: Topoisom_bac Zn_ribbon_GRF Toprim zf-CCHC zf-CCHC_3 zf-CCHC_2
Other DBs
NCBI-GeneID: 67024468
NCBI-ProteinID: XP_043187828
UniProt: A0A8H8PCK5
LinkDB
Position
16:join(2855043..2855123,2855174..2855359,2855406..2855519,2855569..2855583,2855639..2855804,2855859..2856111,2856160..2856241,2856291..2856316,2856376..2856426,2856478..2856698,2856749..2856940,2856993..2857171,2857226..2857351,2857403..2857724,2857791..2858071,2858126..2858356,2858409..2858436,2858498..2858583,2858646..2858858)
AA seq 950 aa
MKVLCVAEKPSIAKSVAQILSGGHFTSRPTQSPYHKNYDFYYAKTGDNYTMTAVSGHLTE
KDFGSALRSWNSCDPFQLFDAPIETRVSKDGERIERNLLSEARGAQMLMIWTDCDREGEN
IGAEVEACYYSSIHHAAQNPVDLDRAQADAVEARILLDLRYGAAFTRMQTLTLQPRFPQL
QEGLISYGPCQFPTLGFVVSRYEQVQAFVPEPFWYIHLSIVSPDADDEEETAFSWRRHHV
FEFDVALALYEGTVENPTARVTKVTKKPTKKWKPLPLTTVELQKAASRLLHMTPKKALDV
AEKLYNDGLIAKQTVDPDWGGFAAGLQNGGFQRPRDGKKNDKAHPPIHPTAHAGNLVGEA
KKVYEYVARRFLACCSKDAEGFQTTVDVVVNDEEFSATGLIVLERNYLEVYKYDKWVGKH
LPDFQEGQEFMPSVCELKDGETTSPSLLTEADLVTLMDKNGIGTDATIAQHIQTIIDRQY
VIARQEGSTKYLVPSTLGIGLIEGYNRIGFDKSLSKPLLRRETERMMVQVCDRQTTKAEM
MARSIDQYKEVFIRAKQQFHLVVDSVGQRINGGPIATNNDAIAPNGRGGRGGAGGRGAGG
RGGGRGRGGGQGNPRPPGENQNSDSDSDGDDDGGRGRGGSRGRRTATRGRAAASPVARRG
RGGRSTAQSDDAPQPTRRTVGTTQPTGGETRQGVTCQCGEPAGERTVTKEGPNKGRKFFT
CGKDRTCDFFEWFDGPSKSNEDSFSRPVQKSRSTIPAKRKSTEHMPPDDSRRCSCKLTAV
QRTVLKDGPNKGRSFWACSNSEQARCGFFEWDDNGASEAGGSGFTPTTHAQPRNEGQGRC
FKCDQPGHWSNACPNGNANPRTQFRNEGTTSSDTSGVCFKCNEPGHWSNACPNGDAGNSR
GTSGGVEDGVRAKAQLDLGRPHGGDEDGDEDERRADLGLQTIIDYNAILY
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgaaggtactttgcgtggcggagaaaccttccatcgcaaaatcggtcgctcagattcta
tcagggggtcatttcactagtagacccacccagtcgccataccacaagaactatgacttc
tattatgccaagacgggagacaattacacgatgactgcggtctctgggcacttaacggaa
aaagatttcggatctgcccttcgcagctggaactcctgtgatcctttccaactattcgat
gcaccgatcgagacaagagtttccaaagatggagaacgtatcgagaggaatctcctcagc
gaagcacggggtgcccaaatgttgatgatttggacggattgcgatcgtgaaggggagaat
attggtgccgaggtcgaggcgtgctattattccagcattcatcatgctgctcagaatccg
gttgaccttgaccgtgcacaggccgacgcagtagaagcccgcattcttctggacttgcgt
tatggtgctgcttttactagaatgcagaccctcactttacaacctcgattcccgcaactg
caagagggattgatatcctacggaccatgtcaatttccgactctgggctttgtcgtatcc
cgatacgaacaggtacaggcttttgttccagagcctttttggtacatccatctctccatc
gtttcaccggacgccgatgatgaagaggagactgctttttcatggcgaagacaccacgta
ttcgagtttgatgttgcgttggcactatatgaaggtactgtagagaatcccacagcacgg
gtgacaaaggtgacaaagaaaccaaccaagaaatggaaacctcttccgttgactactgtt
gaacttcaaaaggccgcgtctcggctccttcatatgacaccaaaaaaagcattggatgtt
gcggagaaattatacaacgatggtctcattgctaaacagacagtggatcctgactggggt
gggttcgccgctggactacaaaacggcggatttcagcgtcctcgtgacgggaaaaagaac
gataaggcgcatcctcctatccatcctaccgcgcatgccggaaatctggtgggcgaggcc
aaaaaagtttacgagtatgttgctcggcgattcttggcttgttgttccaaggacgcagaa
gggttccaaaccacagtcgatgtcgtagtaaatgacgaagaattcagtgccactgggctg
attgttctggagcgaaattatcttgaagtatacaaatatgacaaatgggttggaaaacac
ctacctgatttccaggagggccaggaattcatgccgagcgtttgcgagctaaaggacggc
gaaactactagtccctccttattgacagaagccgatttggttactttgatggacaagaat
gggattggaactgatgcaaccattgctcagcatattcaaaccattattgatcgccaatat
gtgatcgcacgtcaggaaggctcaactaaatacctcgtgccctctacgctaggcattggc
ctcattgaaggctacaataggatagggtttgataagtcgttgagtaaaccactattgaga
cgtgagaccgagcgtatgatggtacaggtctgcgatcgccaaactaccaaagcagagatg
atggctcggagtattgaccaatacaaggaggttttcattcgcgctaaacaacaattccat
ttagttgttgatagcgtcgggcaacgtatcaatggtggcccaatagctaccaataatgat
gccatagccccaaatggaagaggtggtaggggaggcgccgggggtcgaggtgcaggcgga
agaggtggaggaagaggaaggggaggtggccaaggtaatccacggcctcctggcgaaaat
cagaattcagattccgatagtgatggtgatgatgatgggggtcgaggtcgtggtgggagc
cgtggacgacgcaccgctacacgagggcgggctgctgcatcgcctgttgcgaggcgcggt
aggggcgggaggtctaccgcccaatccgatgatgcacctcagccgacacgtagaacggtg
ggtaccacgcaaccaacaggcggcgaaacacgccaaggcgttacctgtcaatgtggagag
cctgctggcgaacgaacagttaccaaggaggggcctaacaaaggtcgtaaattcttcact
tgtgggaaggaccgaacctgcgactttttcgagtggtttgatggcccttccaagtctaat
gaagatagcttctccaggcccgtgcagaaatctcgatccacgatacctgctaagcgtaaa
tccaccgaacatatgccacctgatgacagtcgacgttgcagctgtaagctaactgctgtt
cagcgcactgtgctaaaggatggaccgaataaaggccgatcattctgggcatgctcaaac
tcggaacaggcgcgttgtggcttctttgaatgggatgataacggggcgagtgaggccggc
ggcagtgggttcaccccgacaacacacgcccagccaagaaacgaaggccagggtagatgc
ttcaagtgtgaccaaccaggtcactggagcaatgcgtgcccgaatggcaatgccaatccc
cgaacccaatttagaaacgaaggaaccacgagtagcgacacatcaggtgtttgtttcaag
tgcaatgaaccggggcattggagtaatgcctgccctaacggagatgctggcaactcaaga
gggacatcagggggggtagaggacggggtaagagcaaaggctcaactagacctcggacgt
cctcacgggggggacgaggacggggacgaggacgaacgaagggcggatttggggctgcag
acgattattgactataacgccatactatattaa

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