Rhizoctonia solani: RhiXN_02739
Help
Entry
RhiXN_02739 CDS
T09256
Name
(RefSeq) nucleoporin FG repeat region
KO
K14307
nucleoporin p58/p45
Organism
rsx
Rhizoctonia solani
Pathway
rsx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
RhiXN_02739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsx03019
]
RhiXN_02739
Messenger RNA biogenesis [BR:
rsx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
RhiXN_02739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
Nucleoporin_FG2
Nup49_C
CENP-K
ING
MG280
CATRA-C
Motif
Other DBs
NCBI-GeneID:
67025019
NCBI-ProteinID:
XP_043178052
UniProt:
A0A8H8NQU0
LinkDB
All DBs
Position
3:join(1111806..1112091,1112154..1112283,1112558..1112626,1112675..1113133,1113200..1113301,1113366..1113453,1113514..1113689,1113748..1113811,1113868..1114122)
Genome browser
AA seq
542 aa
AA seq
DB search
MPRRPAPTALHLVKGPSPARGEPRHTLPAPPQPVFQPKMITKPRSSSTASRSRVDAPLLT
FVGPDPTDKSSVDGVMFESPIERGYIPQWDANPVAVTGASRRAQPGPWDRTRINALPQER
MTGLIAVPKPVVANPAPLCRRYKHVTVGNSTASTYFRPKMFSFGSAAAKPATTGFGGSLF
GQANTTQATPATTGGLFGAGANTSGQPGNAPTTTATNTGGLFGSTQPAAGTSTATTGSGL
FGTQQPTTTATTGGLFGAQPAATTATTAPTGGLFGAQPAASAPTGAGLFGAQTGANAAAG
TTGSSFGFGASAAAPAPAQPAAQASGPFTRTTKFNDLPDAQKKVFEEIERVQISVELKAQ
KLGEEIAKEQAALDELTRSLSAASSALSSDRLAADDQRTKTDRNLQDALIATRIIDGFTK
PQQMGGYLTSYANFPLEYFTRQVEEMKERVQRYKSTVEQIERKLAQVYEANSAQPAQPSP
QAIANALRAQHASFMALAARTAEIDAAVRNTRPRIQRGGEPRPDPRAIRLRPRVKKTIRW
MR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtcgacctgcccccactgcacttcatctcgtcaagggcccttcccccgcgagg
ggggagcctcgacatactcttcctgcaccaccgcagcctgtattccaacccaagatgatt
accaagccgcgctcgagctcgaccgcctctcgaagcagagtagatgcaccgctgttgacg
tttgttgggccagacccaacggataagagtagtgtagatggcgtgatgtttgagtctccg
atagagaggggttacattcctcagtgggacgccaaccctgtcgctgtcactggggcaagc
cgaagagctcagcccggcccatgggaccgtacacgaatcaatgcgctaccgcaagaacgg
atgacaggactcatagccgttcctaaacccgtggtcgccaatcctgcaccactttgccgg
cggtacaaacacgtgactgtaggcaactcgaccgcgtccacctactttcggcccaaaatg
ttcagcttcggatctgctgctgcgaaacccgctacgactggattcggaggatcactcttt
ggacaagccaacacgacacaagcaactcccgctacgaccggaggactatttggggctggt
gcaaataccagtggtcaaccaggaaatgcacctactactactgctacgaacacaggaggg
ctgtttggctctactcagcccgcagctggcactagcacagcaaccactggaagtggattg
tttggcacacaacagcccactactacggccacaacaggtggattgtttggagctcagcct
gctgctacgaccgccactaccgcccctactggtggactatttggcgcacagccagctgcg
agtgctccaaccggagctggcctatttggtgcccagaccggagcgaatgccgccgccggt
accactgggtcctcatttggctttggcgcatcagcagctgctcctgctcctgctcagcct
gccgcccaagcgtcaggtccattcacccgaacgacgaaattcaacgacttgccagacgca
caaaagaaggtattcgaagaaatcgagcgagtacaaatcagtgtcgagctgaaagcccaa
aaacttggagaggagattgcaaaagagcaagcagccttggatgaattgaccaggtcacta
tccgccgccagctcggccctgtcatccgaccgtcttgcagcagacgaccagcgcactaaa
acagaccggaacctccaagacgcgcttattgcgactcgaatcatcgatgggtttaccaag
ccgcagcagatgggaggatacctcaccagctatgccaactttccccttgagtactttact
cgacaagtagaagaaatgaaagagcgtgtgcagagatacaaatccaccgtcgagcaaatc
gaacgtaagctcgctcaggtctacgaagcaaattcggcacaacccgcccaaccgtctcca
caagcaatcgccaacgccctccgcgcgcaacacgcatcgttcatggcccttgcagcacgc
accgccgaaatcgacgccgcggtcagaaacacaaggccgcgtatacaacgaggtggagag
cccagaccggatccgcgcgcgatccgtttgcgcccgcgagtaaagaagacgatacgttgg
atgcgttga
DBGET
integrated database retrieval system
