Rhizoctonia solani: RhiXN_02747
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Entry
RhiXN_02747 CDS
T09256
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K15174
RNA polymerase II-associated factor 1
Organism
rsx
Rhizoctonia solani
Pathway
rsx04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
RhiXN_02747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsx03021
]
RhiXN_02747
Transcription machinery [BR:
rsx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
RhiXN_02747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
67025027
NCBI-ProteinID:
XP_043178060
UniProt:
A0A8H8NS85
LinkDB
All DBs
Position
3:complement(join(1135640..1135819,1135875..1136270,1136328..1136565,1136647..1136854,1136921..1137150,1137206..1137222))
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AA seq
422 aa
AA seq
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MSSKKGKLDLLVKVRYTNPLPAPPCPPKLLNIPTHPNRYVRPEFTATLAAETPLPMVVDS
ECGMPLDLFGWDGLWDGRMEYQELNPTEPIELDEADAELLFEPPSHAHVPAATNGHSLPS
TPSVNVQPNVSWLRRAEYASRSMTRQGNGPEMPLEEEITVDASLPAQIAVIEKSFDALPP
LNSLTHPTRKDADGKPLTVASSFELLPDVDIWANPYLQIRFIERPGERPLDMPDPRLDCG
ILRPQQTEDDEHFISFYLPTEDADAEAFKARRRAPVTAVMNETTDFEFQRDYESAKIEND
ITNEFLVVIDEGGMNADGTPVISGHAGQSDGVHSVEGVHEGRKSGAYYKAVERKIVLKKK
PVIKGQEIDYTDKWDVIKLFHIPIAAEDQEERNELQAEVTDPQWTFGRLDAPGEADEEMA
TD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagctccaagaaaggaaagctagatcttctcgtcaaagtacgatatacgaaccctcta
ccggctccgccatgcccgcccaaactactgaatatcccaacacaccccaatcgttatgtc
agacccgagtttacagcaacgctggcagccgagacgccgttgccgatggtcgtcgactcg
gaatgtggtatgccacttgacttgtttggctgggacggactgtgggacgggagaatggaa
taccaagagttgaacccgaccgagcccatcgagctggacgaagcggatgcggagctgctg
tttgagcctccttcacatgcgcatgtccccgctgcgacgaatggccattcattgccctcg
actccgagtgtgaacgttcagcccaacgtgtcatggctgcgccgtgcggaatatgcctcg
cggtccatgacgaggcaaggcaatggtcctgaaatgccgctcgaggaagaaatcacggtc
gacgcgtcgttgcccgctcaaatagcggtgatcgaaaagtcgtttgacgccttgccgcct
ctgaacagtcttacacacccaacccgaaaagatgcagatggcaagccgttgacggtcgct
tcctcgtttgaactcttgccggatgtggacatttgggcgaacccgtatctacaaattagg
tttatcgagagacctggtgaacgtcctcttgacatgcctgaccctcgtctcgattgcgga
attctccgaccgcaacaaacagaagacgacgaacactttatctcgttctacctcccgacc
gaagacgcagatgccgaagcgttcaaagcacgtcgccgggctcctgttaccgctgtcatg
aacgaaacaaccgactttgagttccagcgcgactacgagtcggccaagattgaaaacgat
attacgaacgagtttttggtcgttattgatgagggcgggatgaatgccgatgggaccccg
gtcatcagtggtcacgccgggcagagcgatggggtgcatagtgtcgagggcgttcatgaa
ggacggaagagtggtgcatattacaaggctgtggagaggaagattgttctcaagaaaaag
cccgttattaaaggccaagaaatcgactatactgacaagtgggatgtcatcaaattattc
catattcctatcgccgcggaagaccaagaagagcgtaatgaacttcaggcagaggtcaca
gatccacaatggacgtttggacgtttggatgcgcctggtgaagcggatgaggaaatggcc
actgactag
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