KEGG   Rhizoctonia solani: RhiXN_02788
Entry
RhiXN_02788       CDS       T09256                                 
Name
(RefSeq) DEAD/DEAH box helicase
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
rsx  Rhizoctonia solani
Pathway
rsx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    RhiXN_02788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsx03041]
    RhiXN_02788
   03009 Ribosome biogenesis [BR:rsx03009]
    RhiXN_02788
Enzymes [BR:rsx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     RhiXN_02788
Spliceosome [BR:rsx03041]
 Complex A
  U1 snRNP components
   U1 related factors
    RhiXN_02788
 Complex B
    RhiXN_02788
Ribosome biogenesis [BR:rsx03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    RhiXN_02788
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 67025068
NCBI-ProteinID: XP_043178101
UniProt: A0A8H8SU50
LinkDB
Position
3:complement(join(1254164..1254296,1254354..1254559,1254612..1254668,1254721..1254746,1255068..1255232,1255489..1255574,1255627..1256040,1256090..1256553,1256604..1256873,1256921..1256923))
AA seq 607 aa
MGDYGSRGYGGGYGGGGGGGGGGGGYGGGGYGGGSYGGGDRMGGLGGGLRSVDWASQTLT
KFEKNFYREHPKVSARSDAEIADFRKQKEMKVQGRDIPRPVTTFEEAGFPDYILTTIKMQ
GFTSPSPIQCQAWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQPLLSPGDGPIALV
LAPTRELAVQIQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML
ETGKTNLRRITYLVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPKDVQKLASD
FLTDFMQVNIGSMELTANHNIKQNVEICTDFEKRSKLIKHLDQISSENAKVLIFVGTKRV
ADDITKYLRQDGWPALAIHGDKEQRERDWVLGEFKSGRSPILIATDVASRGLATQLWDVS
WSVAALGLFPELVATGLVPELLSGVPTRFVLVEPTHLFAQAIRDIVSDVKDVGYVINYDF
PNNCEDYIHRIGRTGRAGQKGVSFTYFTTENAKQARELITILREAKADIPSQLEEMAMYG
GGGGGRGRYGGGGGRGGGRGGRDGGYGGRDNGYGNREGGYGSRDRDSHGGGRGGGRGGGY
GGGDSRW
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgggtgattacggcagccgcggatacggtggtggttatggtggtggtggtggcggcggc
ggcggcggcggaggctatggcggtggaggctacggtggaggaagctatggcggaggcgac
cgcatgggtggcctcggtggtggcctccgatccgttgattgggcctcgcaaacgttgaca
aagtttgaaaagaacttttaccgcgagcaccccaaggtttctgcccgctctgatgccgag
attgcggacttccgtaaacagaaagagatgaaggttcaagggcgtgacattccccgcccg
gtgacgacctttgaggaggctggtttcccagactacattctcactactatcaaaatgcaa
ggctttacttctcctagtcctatccagtgccaggcctggcctatggcgcttagtggacgt
gatgtcgtcgccattgcccagaccgggtccggaaagaccatctcgtttgctcttcccgct
atgcttcacatcaacgcccagcctcttctcagccccggagacggccccattgcgcttgtc
cttgctcccactcgtgaactcgctgttcagatccagcaagagtgcaccaagtttggatcc
aactcgcgtattcgtaatactgccatttacggaggcgctccaaagggtcctcaaattcgt
gaccttcaacgaggagtagagattgtcattgctacccccggtcgtttaattgatatgctc
gagactggcaagaccaatttgcgccgcatcacctaccttgtcatggacgaagccgaccgc
atgcttgacatgggtttcgagccccagatccgaaagattgttggccaaatcagacctgat
cgtcaaacgctcatgttcagcgcaacatggcccaaggatgtccaaaagctcgcctccgat
ttcttgaccgactttatgcaagtcaacatcggctcgatggaactcaccgcgaaccataac
atcaagcagaacgtcgagatctgtaccgatttcgagaagcgcagcaagctcatcaagcac
cttgaccagatcagcagcgaaaatgccaaggtcttgatctttgtaggcactaagcgagtt
gcggacgatatcaccaagtacttgagacaagatggctggcccgcactcgccattcacggt
gataaagaacaacgcgagcgtgactgggtgctaggcgagttcaagagtggacgttcgcca
attttgatcgctacggatgtagcgagtcgtggtctcgccacgcagctctgggatgtgtcc
tggagtgttgcggctttgggactgttcccagagttggtagccacgggactcgtcccagag
ctgttgtcgggagtcccgacgagattcgttctcgtcgagcccacccatctctttgcacag
gccattcgagatattgtatctgacgtcaaggatgttggatacgtcattaactatgacttc
cctaacaactgcgaagactatattcatcgtatcggtcgtacagggcgcgctggccaaaag
ggtgtctcattcacttactttaccacagagaacgctaagcaagcgcgcgaattgatcaca
atcttgcgcgaagccaaggctgatattccttcgcaactcgaggagatggccatgtacggc
ggcggaggtggaggacgtgggcgctacggtggcggaggaggacgtggtggaggccgaggt
ggccgtgatggtggttatggcggacgcgacaatggctacggaaatcgtgaaggcggttac
ggcagccgtgatcgcgactcacacggcgggggtcgtgggggtgggcgcggtggaggatat
ggcggcggtgacagccgatggtga

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