Rhizoctonia solani: RhiXN_02814
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Entry
RhiXN_02814 CDS
T09256
Name
(RefSeq) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rsx
Rhizoctonia solani
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsx03016
]
RhiXN_02814
Enzymes [BR:
rsx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RhiXN_02814
Transfer RNA biogenesis [BR:
rsx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RhiXN_02814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
WH_CYT4
Motif
Other DBs
NCBI-GeneID:
67025094
NCBI-ProteinID:
XP_043178127
UniProt:
A0A8H8NQZ0
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All DBs
Position
3:join(1322113..1322543,1322601..1322633,1322663..1325087)
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AA seq
962 aa
AA seq
DB search
MLSVCRSKPRQLIGLLSPVRNLTHTTRSFPSSDQDDGPDRFMHPNRRRKEGKAAYKAARQ
TIKKMARAERGEVPKRKSRGLDELEETRRSVIGAIPVGTNFQSERSVAFNVYELRSEDLN
KDGDDFELAPELRVEPGSFVEIRRNGMAKWGVVLGDENSIVEWRGIESSPRDVQFSVARL
IEPGLAQQAGMGTFANEANRGETQARISIGKTLRNLNRRIETAERLVQSAAQRLYEHAKH
PDGRTWSSITLADGVAFIAGDEAPTLELTYAVHRHFMDDSLHYIADTFDHRLSNTFSVRP
AQEIKTIRRVVDWVRSNNPVLDEFATKARAIIEATAAIRKNSVGESPARVEPQEPLPILN
KADHDIINFVRYYLRQRRELQMNPCSLSLPIILTKVSSSYMPLVPHAVFRFLEDLSLFPP
WSNHVTQDVDLQMYEFTDTLDTPLPGSEQAQAIPPVSVNDTRISASKTIDGLDNMRHDFG
DLSVYVIDDSSAEELDDGISIERTLDGTDNVWLHVHIADPTSVLQPNDPLALDAARRTAT
AYFPEATYPMLPPTEQSLDALVGKDGASMNVLTFSLLVSPSGDILNHSVRPSVVRKVHVL
RYDDVTRGLGSSPIEPLWPFGKPKVQPPGKEPTPIPSETIPDLQLLHKVTLNLAKTRVSK
TDSVLWSQPRALMLMEKTKILTGRDPREMPRMYQGFPHIDYSVQPGTLEDPQHALDVSRA
MVAECMISAGRVASLFAQEHGIPMIYRSLARPGGVAVDKYQPLLAKRDPYQGTVLYRDAI
VQQLPQVTTQPMTTPGVHWQLGISAQEGYVRATSPLRRYLDMVCHWQIKAALHPKSAGVK
PPFSIDELKTLMMKQHLHEHARRRAGNGALRLWAMRYIQNKMTNGGHEVLRSLEAVITGR
PMNFASSLTFVHPVMITSLGLPAALTGMNMDNPPPVGSTLKVEISNFEISYTPRLTVRQR
RS
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctgtctgtcgctccaaaccaaggcagctcatcggtctactaagccctgtacgg
aatctgacgcacacaactcgttcattcccttcatcggaccaagacgatggtccagatcgg
ttcatgcatccgaacaggagaaggaaggaaggaaaggcagcatacaaggcagcgaggcag
acgatcaagaaaatggctcgtgcagaaaggggggaggttccaaagagaaagagtaggggc
ctagacgagctggaagagacccgcaggtctgtcattggagccatccctgtcggaacaaac
tttcaatccgaaaggagcgtcgctttcaatgtgtacgaacttcgttcagaggatctgaat
aaggacggagacgactttgagttggcccccgagctacgagttgagcctggtagttttgta
gaaattcgccgcaatggaatggcaaaatggggggtcgtgcttggtgatgagaactctatt
gtcgagtggcgaggcattgaatcatcccctcgcgatgttcaattctccgtggcgaggttg
atagagcctggactcgcccaacaggcaggaatggggacctttgcgaacgaagcaaaccgc
ggcgaaactcaggctcgtatctcgatagggaaaacgttaaggaatttgaaccgacgtatt
gaaacagccgaacgcttggtacagagtgctgctcaacggctttacgaacatgcaaagcat
ccggacggaagaacttggtccagcataactctcgcggatggtgttgctttcattgctgga
gatgaagctccgaccctcgaactcacttacgctgtccatcgccattttatggacgatagt
cttcattacatcgcagacaccttcgatcataggctttcaaatactttctccgttcgcccg
gctcaggaaataaaaaccatacgacgggttgtagattgggttcgaagtaataatcccgtg
ctcgatgaatttgccaccaaggcacgagcaattatcgaggcgactgcggcaatcaggaag
aatagtgtgggtgagagccctgctcgagtagagcctcaggagcctcttcctatcctaaac
aaagccgatcatgatataatcaattttgtgcggtactacctgcgccaacgacgtgaactc
cagatgaacccatgctcgcttagcttgccgataatcctaaccaaagtctcgtcttcgtat
atgccgcttgtccctcatgcggtattccgattcctcgaggatctgtcccttttcccacct
tggtcaaatcatgtaactcaggatgtcgatcttcagatgtacgagtttactgataccctc
gataccccacttcccggttcagaacaggcccaagctattcctccggtatcagtcaatgat
acccggataagtgcgtccaagaccatcgatgggcttgacaacatgcgccacgacttcggc
gacctttctgtatatgtgatcgacgatagctctgcggaagagctcgatgatggtatatct
attgaacgaacacttgatggcacagacaatgtgtggcttcatgtgcatattgccgacccg
acgtccgtacttcagcccaatgatcctctggctcttgatgccgctcgccgaactgcaacc
gcgtactttcctgaagcaacctaccctatgcttcccccaaccgagcaaagtcttgacgca
ttagttgggaaagatggggcttccatgaatgtccttacgtttagcctgctcgtcagccct
tcgggtgacatcctcaatcactcggtgcgcccgtctgtggttcgaaaggtccacgtacta
cgttatgacgacgttactcgaggactaggttcgtcccccatcgagcctctttggccgttt
ggaaaaccgaaagttcagcctcctggcaaagagcctacccctattccttcagagacgatc
cctgacctccagctcttgcacaaagtcaccttaaatctggccaaaacacgcgtatcaaaa
acggactcggtgctctggagccagcctagggccctaatgctaatggaaaaaaccaaaata
ttgactggtcgggacccacgcgagatgccacgcatgtatcaaggattcccgcacatagat
tactccgttcaaccgggtacattggaagacccccagcatgcactcgacgttagtagagcg
atggtggccgaatgcatgatttctgcgggccgggtagcatccttgtttgcccaagaacat
ggaattccgatgatctatcgctctttggctcggccaggaggcgtcgcagttgacaagtac
cagccccttttggcaaaacgcgatccatatcaagggaccgtgctctatcgagatgcaatt
gtccagcaactgccccaggttaccacccaaccgatgactactccaggggtgcattggcaa
cttggaatatccgcccaggaagggtatgtccgtgctacatctcccttgaggcgatatctg
gatatggtttgtcactggcaaattaaggccgctctccaccccaagtctgcgggtgttaaa
ccgccgttctcgatcgatgaactcaaaacattaatgatgaaacaacatcttcatgaacac
gcacgtcgccgtgcaggaaatggtgcactccgactctgggccatgcgatatattcaaaac
aagatgacgaatggaggtcatgaagtgctccgctcattggaggctgttattaccgggcga
cctatgaactttgcgagcagccttacgttcgttcacccagtcatgatcaccagcctaggc
cttccagctgccttgaccggtatgaatatggacaaccctccacccgtcggtagcactctt
aaagtcgaaatatccaactttgagatcagttatactcctcgattgacagtccgacaaaga
cgctcttga
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