Rhizoctonia solani: RhiXN_02879
Help
Entry
RhiXN_02879 CDS
T09256
Name
(RefSeq) histone domain-containing protein
KO
K14962
COMPASS component SWD2
Organism
rsx
Rhizoctonia solani
Pathway
rsx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
RhiXN_02879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsx03019
]
RhiXN_02879
03036 Chromosome and associated proteins [BR:
rsx03036
]
RhiXN_02879
Messenger RNA biogenesis [BR:
rsx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
RhiXN_02879
Chromosome and associated proteins [BR:
rsx03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
RhiXN_02879
COMPASS/SET1 complex (yeast)
RhiXN_02879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
WD_LRWD1
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
67025159
NCBI-ProteinID:
XP_043178192
LinkDB
All DBs
Position
3:join(1520264..1520314,1520370..1520548,1520597..1520761,1520814..1521519,1521567..1521620)
Genome browser
AA seq
384 aa
AA seq
DB search
MDLVHQAKLSWTKTSWHQRLKPSRIFKSAVENDASGPPGRYNLPNHITGLTFDDFGDFLL
TASEDETFRLYNAKTGKHVKTLASKKYGVDLPRFTHKNTTIVYASTKEDDTIRYHSLHDN
KYLQYFRGHKKKVISLDVSPVDDGFMSSSLDNTVRLWDLRSPQCRGLLNLPAPPVVAYDS
TGVVFAVAVNQYSRILLYDMSNFDKDPFKTIHLDDVRLAKISYPPRIPVMTSMSFSTNGK
WLLVGTAGEVHYVLDAFDGDLLCRLEGHLGLERGKTGNSLGVVPDRGISGEEVCWTPDSR
FVVSGSQTGKIHVWDVAKFLERQPPLTPQSEVPTLNASLSLDGHPGASRCVKFNPRNCMM
ATAGAELAFWLPEASTDGSKQPGN
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggatctggtacaccaggccaaattatcttggacgaaaacatcatggcatcaacgtttg
aagccctccagaatatttaaatctgctgtggaaaacgacgcgtctggtccacccggacgc
tacaaccttccaaaccatatcacagggcttacgttcgatgatttcggagattttttactg
accgcctcggaggatgaaacctttagattatataacgcgaaaactgggaaacacgtgaag
actctcgcgtccaaaaaatacggagtcgatctgccgaggtttacgcacaagaacacaact
attgtttatgcatcaaccaaggaagacgatactattcgataccactctttacatgacaat
aagtatctacagtatttccgaggccacaaaaagaaggtgatttccttggacgtgtctcct
gtagatgacgggttcatgtcttcctctctcgacaacacggtcagactgtgggatctacgc
tctccccaatgtcgaggcttactaaacctacctgctccaccagttgtagcatatgactct
acaggtgttgtctttgctgttgccgtgaaccaatattcgcgtattctactatacgatatg
agtaactttgacaaggatccgttcaagacgattcaccttgacgacgtacgcttggccaag
atttcgtacccaccgcgtataccagtgatgacttccatgtcgttctcaaccaacggtaaa
tggcttctggtcgggacagctggggaggtacactacgttcttgatgcattcgatggagat
cttttatgcaggctcgagggtcatcttggactcgaacgtggtaaaacgggcaattcccta
ggggtcgtacctgatcgagggatatcaggggaagaggtgtgctggactccggactctaga
ttcgtggtcagtgggtctcagaccggcaaaatacatgtctgggatgtagccaaattcttg
gaacgccagcccccactaactccgcaatcggaagtaccaacattgaacgcatcgttaagc
ttggatggacatccaggagccagccgatgtgtgaagtttaatcctcgaaactgtatgatg
gcaacggctggagcggaattggcgttctggctgcccgaagcgagcacagatgggtccaaa
cagccaggaaattag
DBGET
integrated database retrieval system
