Rhizoctonia solani: RhiXN_02929
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Entry
RhiXN_02929 CDS
T09256
Name
(RefSeq) splicing factor SF1
KO
K13095
splicing factor 1
Organism
rsx
Rhizoctonia solani
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsx03041
]
RhiXN_02929
Spliceosome [BR:
rsx03041
]
Complex A
Other components
Complex A specific factors
RhiXN_02929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
NSUN5_N
KH-I_KHDC4-BBP
Methyltr_RsmB-F
NSUN5_fdxn-like
zf-CCHC
zf-CCHC_3
KH_1
Fibrillarin
DnaJ_CXXCXGXG
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
67025209
NCBI-ProteinID:
XP_043178242
UniProt:
A0A8H8NRH7
LinkDB
All DBs
Position
3:complement(join(1682405..1683085,1683144..1683591,1683644..1683833,1683882..1684023,1684078..1684108,1684164..1684298,1684351..1684498,1684551..1684727,1684915..1684958,1685033..1685178,1685232..1685270,1685323..1685957,1686008..1686019,1686084..1686207))
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AA seq
983 aa
AA seq
DB search
MNFYKEAASKLDLIESKKASIKGCLSLAAPKDRKRMGALIIETLKFKGTITTLIEATPMM
RDERRHLFSKNFAAVLVHDLLFSSGGIQAGDGPIKQAVNRHKTRLQAELTKLKIRRGVKS
NQELAQPDDPRSANIPRYLRVNRNIWTTEQAIEFYSSKGYAPCGDPGVPPKCVDDYFTFD
TVIDYKSRKQFRLDDHVPDLLIFNPVHELHHDEAYKTGKMIAQDKASCFPAVVLDPPAVE
NAWVIDATAAPGNKASSTSHISALMGNKGKIIAFERNKRRYKTLHEMVRRAKCQNVETIL
GDFLEQDPLDERFKLVTHIGSGIVNRLDYLTQDIPSVERIVYSTCSVHATENEGVVGDVL
ASSEFATRGFKVAPRSQVLPNWSRRGITTTSLDAKVSDALIRCLPGEDSPGTNGFFVSCF
IREKGTGWDSSRGADPSFKRKIDLVIIVVFLFETTASRAITQCCCTPLPPASCVPVQTIK
MWKPAGRAITGTNDIPLGNKRRFGPAVIEDVPKAEIAQASPSSFPRSSVVQDEPGYGPTS
ATLSEPDLPRKRKSRWGDAKSEPVGLPTAISSSGVSQRELDNYAVKIRLDEINRKLQTNT
FIPPESERSPSPPPTYDSHGRRTNTREVRYRKKLEEERVRLVDRAMKSDPNFRPPAEYHQ
QKRSLRPQDKVYIPVKEFPEINFFGLLVGPRGNSLKKMEKESGAKISIRGKGSVKEGKGR
PDAYADDSEEDLHCLVMADSDEKVASCVALINKVIETAASTPEGQNDHKRNQLRELAALN
GTLRDDENQICQNCAGVGHRKYDCPEQRNYTANIICRTCGNTGHMARDCISRRGDPNGFG
QPNGFGAPQAPFTPNTSTPSTGNKAFDSEYASLMAELGEGAGGNKSGGGVWRGDGSMPLS
GLDPNSSVPPWRRPEMWQTPTVNQGYRPPYGGMASGVYNGNSPWAQAGYQQYPPAGGASA
AGVDAAAYAQYYQSMGYNAGQAS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttacaaagaggcagcgagcaaactcgacctaattgagtccaagaaggcttca
attaaaggctgcttgtcgctagcggcacccaaagatcgtaagcgaatgggcgcactaata
attgaaacactcaaatttaagggcacaataaccacattaattgaggcaacgcccatgatg
cgggacgagcgccgacatttgttttcaaagaatttcgccgcggtgctcgtccatgattta
ttgttcagctcagggggcattcaagccggggatggtcctattaaacaagctgtcaatcgt
cacaaaactcgcctccaggcagaattaactaaactcaagattcgaagaggcgtcaagtca
aatcaagaattagcacaaccagacgaccctcgctccgcgaacattcctcgctatttgcga
gtaaataggaatatctggacaacggagcaagccatcgagttctatagttcaaaaggatac
gccccgtgtggcgacccaggcgtccccccaaagtgtgttgatgattacttcacctttgat
actgttattgattacaagtcaagaaaacagttccgcctcgatgaccatgtccctgactta
ttaatattcaatcctgtgcatgaactacaccacgatgaagcttataagactggtaagatg
atcgctcaggacaaagcctcctgcttccctgcagtggtgttggatccacctgcggtggaa
aatgcttgggttattgatgcgacagctgcacctggtaataaggcgagttccacatctcat
ataagtgcgttaatgggaaacaaaggcaagataatcgcgttcgagagaaacaagaggcgg
tacaaaacacttcatgagatggtccggagagccaaatgccaaaatgtcgaaactatcctg
ggagattttcttgaacaagaccctttggacgaaagatttaaattggtgactcatattgga
tctgggattgtgaaccgattggattacctgactcaagacattccgtccgtagaacgcatc
gtttactcgacttgtagtgttcatgctacagaaaatgaaggggttgtaggggatgtcctt
gcaagcagcgagtttgcaacaagaggcttcaaagttgctccacgttcacaggtcttacca
aattggagtcgtcgaggtataacgactacatcgctagacgccaaggtatcggatgcactc
attcggtgtttgccaggagaggacagcccggggacgaatggattctttgtttcctgtttt
atcagagaaaagggtaccggatgggacagctcgagaggtgctgacccgagctttaagaga
aagatcgacttagtcataatcgttgtatttctatttgaaacaactgcgtcacgtgcaatc
acccagtgctgttgtacgccacttcctcctgcatcctgtgtgccagtacaaactatcaaa
atgtggaagccagctggaagagccatcacaggtaccaacgatattccgctgggcaacaag
cggcgattcggtcctgctgtgattgaagacgtacccaaagccgaaatcgctcaagcttct
ccttcttctttcccccgctcttctgtagtccaggatgagcctggctacggccccacctca
gcaacactgtccgagcccgatcttccgcgcaaacgcaaaagtcgttggggagatgcaaaa
agtgagccagttgggctaccaactgcaatttcctccagtggcgtgtcgcaacgcgagctg
gataactatgctgtaaaaattcgtctcgatgaaattaatcgaaagcttcaaactaatact
ttcattccaccggaatctgagcgatctccatcgcctccgccaacttacgattcgcatgga
aggcgcactaataccagagaggtacgctaccgaaagaagctagaggaggagcgggttcgc
cttgtggatcgtgctatgaaatcagatcccaacttccgacctccggctgagtatcaccaa
caaaaaaggtcacttcgcccgcaagacaaagtatatattcctgtcaaggaatttcctgaa
ataaactttttcggcctgcttgtaggtcctcggggcaactcactcaaaaagatggagaag
gaatccggggcgaagattagtattcgtggcaagggtagtgtgaaggaaggcaaaggtcga
cccgacgcgtatgcagatgacagcgaggaagaccttcattgtttggttatggcagattcg
gacgaaaaggttgcttcctgcgttgctctgatcaataaggtcattgaaacagctgcttcc
actcccgaagggcagaatgaccacaaacggaatcaattacgcgaactggcggctttgaat
ggtaccctccgggatgacgagaaccaaatctgccaaaactgcgctggtgttggccatcgc
aagtacgattgccccgaacagcggaattatactgctaatatcatatgccgaacatgcgga
aatactggacacatggcacgtgactgcatatctcgcaggggggatcccaatggctttggt
cagccaaatggttttggtgcgccccaggcaccgtttacaccgaatacttctactccgtca
accggcaacaaggcgttcgattccgaatatgcgtctcttatggcggagcttggagaggga
gccggcggcaacaaatcgggtggaggggtctggcgtggtgatggttcaatgccgctgtct
ggactcgatcctaatagcagtgttcctccgtggcgtaggccagaaatgtggcaaaccccg
acggttaaccaggggtatcggcctccgtacggaggaatggcgagcggcgtctacaacggg
aattccccttgggctcaagctggataccaacagtatccgccagcgggcggagcaagcgcg
gccggcgtggatgcggccgcttatgctcaatattaccagtctatgggctataacgccggg
caggcatcttag
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