Rhizoctonia solani: RhiXN_03314
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Entry
RhiXN_03314 CDS
T09256
Name
(RefSeq) RNA recognition motif protein
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
rsx
Rhizoctonia solani
Pathway
rsx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
RhiXN_03314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsx03041
]
RhiXN_03314
Spliceosome [BR:
rsx03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
RhiXN_03314
Complex B
RhiXN_03314
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
U1snRNP70_N
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
67025594
NCBI-ProteinID:
XP_043178627
UniProt:
A0A8H8NTL5
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All DBs
Position
3:complement(join(2827540..2827744,2827806..2827843,2827898..2828262,2828336..2828452,2828507..2828648,2828705..2828769,2828827..2829009,2829057..2829123))
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AA seq
393 aa
AA seq
DB search
MTHLLPQTCSNYSLLAHRSRSFGVAALLAEIREANERGIVEADDRDREEGEEKFTYAEEI
KRGIYREQRQKRKKEEFQKAKETYKPADDPEATGDPYKTLFISRLSKNATEDDLRKEFGT
YGRIERIRLVRNKRGVSRGYAFIVYDREKDMKAAYKEADGISILGKRILVDVERGRTVRG
WKPRRLGGGLGGRPKPVAPAAEPSRFGPPTGGGGGGGFRGDRGRGGGFRGGDRGGFRGGR
GGGFGGRGGYGGGGGDRGYGDRAGGGGGGGGGGGYGGGGGDRSFGGGGDRGFGGGGGGYG
GGDRGYGPRGGDSGPGGGGGGYGPNRGRGGGIGYQGGFGHGHQDSGYGGGAGAGAGAGGG
GGGGYGGGGQDNGYPPKRGYDDGQDRDSKRTRY
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgacacacctcctcccccaaacctgctcaaactattcgctcctcgcccaccgctcccgt
tcgttcggtgtggctgcgttgttggccgagatcagggaagccaacgagcgcgggattgtt
gaggctgatgatcgggatcgggaagagggagaggaaaagttcacatatgccgaggagatc
aagcgtggcatctatcgtgagcagaggcagaagaggaaaaaggaggagttccaaaaggcc
aaggagacgtataaacctgcagacgaccccgaagcaaccggagatccgtacaagactttg
tttatttcaagattgtctaaaaatgccacagaagacgacttgcgcaaagagtttggaaca
tacggacgcatcgaacgaatccggctcgtcaggaacaaacgcggagtgagccgcgggtac
gcgtttatcgtgtatgatagggagaaagacatgaaagccgcatacaaagaagccgatggg
ataagtatactcggcaaacgtatactcgttgacgtagaacgcggcagaaccgtccgagga
tggaaacccagacgtttgggtggtggactcggaggtcgacccaagccagttgcacccgcc
gccgagccgagccgctttggacctcctacaggaggtggaggcggaggcggattccgaggt
gatcgaggcaggggcggaggattcaggggcggtgatcgtggtgggttcaggggcggacgc
ggtggcgggtttgggggacgaggtgggtatggcggaggaggtggtgaccgtggatacggt
gatcgtgctggtggaggcggtggaggagggggaggaggtgggtacggaggtggaggaggt
gaccgcagctttgggggaggtggagaccgcggctttggcggcggtgggggagggtacggg
ggaggagatagggggtacggtcctcgtggaggcgactcgggtccaggtgggggtggtgga
gggtacggacccaacaggggccgaggcggaggtattggctaccaaggaggctttggtcat
gggcaccaagatagcgggtatggtggtggcgcgggagcaggagcaggagcaggaggaggc
ggtggaggaggatacggcggcggtgggcaagataatgggtatcctcccaagcgcggttac
gatgatggacaggaccgggattccaagcgcacacggtactag
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