Rhizoctonia solani: RhiXN_03872
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Entry
RhiXN_03872 CDS
T09256
Name
(RefSeq) RNA polymerase II-associated protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
rsx
Rhizoctonia solani
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsx03021
]
RhiXN_03872
Transcription machinery [BR:
rsx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
RhiXN_03872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_8
TPR_14
TPR_7
TPR_6
TPR_12
ARM_TT21_N
ANAPC3
TPR_11
TPR_Slam
TPR_17
TPR_CcmH_CycH
NatA_aux_su
TelK_N
TPR_WDR35
Iml2-TPR_39
MIT
BCL9
Motif
Other DBs
NCBI-GeneID:
67026152
NCBI-ProteinID:
XP_043176108
UniProt:
A0A8H8NLB5
LinkDB
All DBs
Position
1:join(1193418..1193436,1193499..1193627,1193674..1193774,1193824..1194011,1194052..1194209,1194263..1195009,1195064..1195632,1195690..1195827,1195884..1196035,1196096..1196659,1196720..1196759)
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AA seq
934 aa
AA seq
DB search
MLLSDAPASTTTKSAFVDQATEFVNAGQAAIVTDSEVPESVNTLFYLTKGIYQMARFSWV
GAEKDFDIVLAKHSSNVIALMGKARILYARKQYREALKGFQECLTLNPKMLPDPRIGIGL
CYWQLEHRERALAAWKRAEQVHPDSCKDPKVPGQQRQDAFLEGVNRLTQAWRESNLNNAS
AATAMSDVFLLKGQLNKACPKSGRANNSTCGYALGRSQRPAPCCSCRPYGRHYDAALVHY
RTAAEEPSHPLLADIGLAQMHVHIDELSAAIHDLDKLVQRNAGIEASAFLASLRAFPRPA
LSAADAVTEQAKAKEIFDKVVRMIDNGAGSGTGGVASDRDMYIEIARLWQKDNADKATKA
LIQAVKLAGTPDARLINNVAVMRHMEGDLVAAKSGYEEAAMVGGGDSDDVVTTVLYNLGR
LHEDLGDTTMAGEVFDKLLARHPEYVDATLRKAQLYMSAGRTSEAAALVKQVSHTHSKDL
NVRAFVSYFALSSDPVPVQDARAFVYTTLNIERADVHALCVAAWINYHMAREGRNMPEQD
KKKRYKNAIDLYKQALLNDPTCAVAAQGLAIMIAEDVTGLAIIPGQPQEEARQREVNLRD
ALGVFTRVRESLVDGSVYCNMGHCYFLREEYDRALECYETASRRFYNGTNVSTLIHLTRT
LYAKANRDQSFATMRQALSYAQRASHLAPTDKSIVYNIAMIEQKAAEMLFALPPDKRTLV
DLESAVQHAGHSQKLFASLHADPSSTTPYNRDVADQRRKYGDSILRKAPEQLSIQQAYEA
QINARRDAAKLKRQEESERVLEAERIAREAREREAERLRVDRQKAREEVEKWNVELAIKA
ESSDEERERKARRKREAGEGGEKKKRKKIKREDDEGGAVFSDEELEDGNKEEKPKKPRLK
KRVVQDAEDLDDDAANRKKKKVKSKATISDSDDE
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcagtgatgctcctgcctccacaaccaccaagagtgcattcgtcgaccaggcc
accgaattcgtcaatgcgggacaagctgctattgttacagattctgaagttccagagtcg
gtcaacaccctgttttatctcacaaagggaatataccaaatggccaggttttcatgggtc
ggagccgaaaaggattttgatattgtgctagcgaaacacagttcgaatgtcattgctctc
atgggcaaggcacgtattctttatgctcgtaaacaataccgcgaagcactcaagggcttt
caagaatgtttaactctcaacccgaaaatgctccctgatccacgaatcggaattggtctt
tgttattggcagctagaacaccgagagcgtgcgttagctgcctggaaacgcgctgaacaa
gtgcacccagactcctgcaaagatcccaaggtcccaggacagcagagacaagacgcgttt
ttagaaggtgttaaccggttgactcaggcatggcgagagagcaacctcaataatgctagt
gctgccacagccatgagtgatgtattcttgttgaagggacagttaaacaaggcatgccct
aaaagcggccgagcgaacaattcaacatgcggatacgctctcggtcgcagtcaacggccg
gctccgtgctgctcgtgtcgcccatacggaaggcactatgacgccgccctcgtccactat
cgcactgcagccgaagagccttcccacccgcttctcgctgatatcggtcttgcacaaatg
cacgtacatatagacgaactttctgctgccattcacgatctcgataaacttgtccaacgc
aacgcaggtattgaagctagtgcattccttgcttccttgcgggcgttcccaagacctgct
ttaagtgctgcggatgctgtgactgagcaagccaaggcgaaggaaatattcgataaggtg
gtccgaatgattgacaacggtgctgggtctggtacgggtggcgttgcgtctgaccgggac
atgtacatcgaaatcgctcgactttggcaaaaggataatgccgacaaggctaccaaggct
ttgattcaggctgtcaagttggctggaactcccgacgctcgattgatcaacaacgtagcg
gttatgcgacacatggaaggcgatttggtagctgcgaagagtgggtatgaagaagcagcg
atggtcggaggtggagactcggatgatgtggtcaccactgtgctatacaacctcggaaga
ctgcatgaggacctaggcgatacaactatggcgggcgaagtattcgataaattgcttgcg
agacacccggaatatgttgacgccactctccggaaggctcaactatacatgagtgcaggc
cgcacatctgaagccgctgcgctcgtaaaacaagtgtctcacacgcactccaaagacctc
aatgtccgggcctttgtatcctatttcgctttatcatcggatcctgtcccggtacaagac
gcacgcgcattcgtatacaccacacttaacatcgaacgtgcggacgttcatgcgctctgc
gtcgcggcatggatcaactaccatatggcccgtgaaggccgaaacatgcctgaacaggat
aaaaagaaacgctacaagaatgcgattgacttgtacaagcaggcactgctgaacgacccg
acatgtgcagttgcagcgcagggattggccatcatgatcgccgaggacgtaactgggttg
gccatcatcccgggccagccacaagaggaggcgaggcagcgggaggtcaatttgcgtgat
gcgctgggagtgtttacgagggtaagggagagtctcgtggatgggagtgtgtactgcaac
atggggcattgctatttcttgagggaggagtacgaccgagctctagaatgttacgaaacg
gcgtccaggcgattctacaacgggacaaacgtctcgacacttattcatctcacgcgtact
ctgtacgcgaaagctaatcgcgatcaatcttttgcgactatgcgacaggcattgagctac
gctcaacgcgcctcgcatcttgcgccaacagacaaatcaattgtgtataacattgcgatg
atagaacaaaaggcagccgagatgttgtttgcgcttccgcccgacaaacggacgctggtt
gatctggaaagcgctgtccagcatgctgggcactcacaaaaattgtttgcttcccttcac
gcagacccctcttcgaccacaccatataatcgggatgtcgcagaccagcggcgaaaatac
ggcgacagtatactccgaaaggcaccagaacagctcagcatccaacaagcatacgaagct
cagatcaacgcccgacgagacgcagccaagctcaagcgccaagaagaaagtgaacgagtt
ctggaggccgagcgaattgctagggaggcaagagagcgagaggctgagaggcttagggtg
gaccgccaaaaggctagggaggaagtagagaagtggaacgtagagttagccatcaaggct
gaatcgagtgatgaagagcgcgagcgcaaggcaaggcgcaagcgggaagctggagaggga
ggagagaagaagaagaggaaaaagatcaagagggaggatgatgagggcggagcggtgttt
tcggacgaggagttggaggatggaaacaaagaggagaaacccaagaagcccaggttgaag
aaacgcgttgtccaggacgcggaagacctggatgatgatgcagcgaacaggaagaagaag
aaagtcaaaagcaaagcgactatatccgactcggatgatgagtag
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