Rhizoctonia solani: RhiXN_04050
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Entry
RhiXN_04050 CDS
T09256
Name
(RefSeq) Helicase conserved C-terminal domain
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
rsx
Rhizoctonia solani
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsx03009
]
RhiXN_04050
Enzymes [BR:
rsx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RhiXN_04050
Ribosome biogenesis [BR:
rsx03009
]
Eukaryotic type
90S particles
Helicases
RhiXN_04050
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
DUF6930
Motif
Other DBs
NCBI-GeneID:
67026330
NCBI-ProteinID:
XP_043176286
UniProt:
A0A8H8SSI7
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All DBs
Position
1:complement(join(1706019..1706179,1706246..1706381,1707104..1707169,1707234..1707596,1707647..1707806,1707857..1708044,1708101..1708245,1708283..1708308,1708371..1708475,1708539..1708866,1708907..1709130))
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AA seq
633 aa
AA seq
DB search
MSAHLSEGPRLKRRRLSESSEAISEASSSSHAGSSDASDSDTGIDSGRTKRSVHPYHTKF
ALISLPPDCNVRPLDSEAISEASSSSHAGSSDASDSDTGIDSGRTKRSVHPELSDSEDDA
PKLQFKFDTAPNRVTKTNRTQLARQPPAPKDVTFGSLGVKPSLVTSLEAMSIRRPTPVSD
RMSAAGTIGNAKTGSGKTMAFAIPILQKLSEDPYGIYALELAFQISEHGDRRWNGHDGTS
ARAGKETHVVVATPGRLVDHMDSNGSEWSLSRLKFLVLDEADRLLTDTFAEDLAKILSKT
PKDRQTCLFTATHGHRQSRALPMPPSARETDAVCIQTDSVETVGTLKQHYLLVPSHVREP
YLFYALCNPPESIAHMRVAAPEPQEPSHKSKKPPPTIIFVSKPKTAAYLAKLLQTLGIRA
TALHSRLKQRERLNSLNLFRSRVVPVLISTDVGARGLDIADVALVVNWDFPGAPEEYTHR
VGRTARAGRNGMAISFVTERDEERYTRSKRGLVSTEEKVLEGLNAVSTAKRIANMTAEVH
EAISPYNNRGTNEADNTRRTSNRHQALTNTLTSSLALVQARMHARKVAHAGSFSHRIIRE
TDKGVLGKKVVQSVRNVNVQDIKAEGFTYGDTR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccacttgagtgagggaccgcgactcaaacgaaggaggctatctgaaagctct
gaggctatttctgaagcctcttcttcctctcacgctggatcatccgacgcttcagactct
gacactggaatagactctggtcgaaccaaacgatctgtccatccttaccataccaaattt
gctttgatttctctaccacccgactgtaatgtccgcccacttgactctgaggctatttct
gaagcctcttcttcctctcacgctggatcatccgacgcttcagactctgacactggaata
gactctggtcgaaccaaacgatctgtccatcctgagctttccgactctgaagacgatgcc
ccaaaattacagttcaaattcgatacagctcctaaccgagtgactaaaactaacagaacg
caactcgcacgacagcctccagctcctaaagacgtcacattcggctcacttggtgtcaag
ccttcactagtcacatctctggaggccatgtcgatccggagacctacgcctgtttcagat
aggatgtctgccgcagggactatcgggaacgccaagacaggttcgggtaaaactatggca
tttgctattccgatattacagaaattatcagaggacccgtacggtatctatgcactggaa
ttggcgttccagatatccgagcacggtgatcgtaggtggaatggacatgatggaacaagc
gctcgagctgggaaggagacccatgtggttgtagctacccccggtcgattggtggaccat
atggacagcaacgggagtgaatggagcctgtcaagactcaagttcctggtgcttgatgaa
gccgaccggctattgaccgatacctttgctgaagacctagcgaagatcctatcgaaaact
ccaaaggacagacagacctgcttgtttaccgcgacacatggacaccggcagtcgagagcc
ttgccaatgccaccctcagccagggaaacagacgccgtttgtatacagacagatagtgtg
gaaacagtcggtactctcaagcagcattacctacttgtcccatctcacgtccgagagcca
tacctgttctatgcgctctgtaacccgcccgagtcaatagcacacatgcgcgtggccgcc
cccgagcctcaagaaccatcacacaaatccaaaaaacccccacccaccatcatcttcgtc
tcgaaacccaaaacagcagcatacctcgccaagttactccaaacgctcggcatacgcgcc
accgcgctccattcgcggctaaaacagcgcgaacgactcaactcgctcaacctgttccgc
tcgagagtcgtcccggtgttgatcagtacggacgtgggcgcgcgtgggttggatatcgca
gacgtggcgttggtcgtgaactgggattttccgggtgcgcccgaggagtatacgcatcgt
gttgggcggactgctcgcgcgggccggaatgggatggcgattagctttgtgactgaacgt
gatgaagagagatacacaaggtcgaagcgcggattggtgtctaccgaagaaaaggtatta
gaaggactgaatgcggtatcgacggctaaacggatcgccaacatgacggcggaggtgcac
gaggctatcagcccttataataatagaggaactaatgaagcggacaacaccaggagaacc
tcgaatcgacaccaagcccttaccaatactttgacctcatcgctggcactggtacaggcg
cgcatgcatgctaggaaggttgcgcatgccggttcattcagccatcgaatcatacgcgaa
actgacaaaggtgttctcggaaagaaagtggttcagtcggtcaggaacgttaacgttcaa
gacatcaaagctgaaggattcacttatggagatacaagataa
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