Rhizoctonia solani: RhiXN_04061
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Entry
RhiXN_04061 CDS
T09256
Name
(RefSeq) histone deacetylase family protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
rsx
Rhizoctonia solani
Pathway
rsx03082
ATP-dependent chromatin remodeling
rsx03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
RhiXN_04061
03083 Polycomb repressive complex
RhiXN_04061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsx03036
]
RhiXN_04061
Enzymes [BR:
rsx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
RhiXN_04061
Chromosome and associated proteins [BR:
rsx03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
RhiXN_04061
HDAC complexes
Sin3A-HDAC complex
RhiXN_04061
BRAF-HDAC complex
RhiXN_04061
REST complex
RhiXN_04061
SHIP complex
RhiXN_04061
MiDAC complex
RhiXN_04061
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
RhiXN_04061
Heterochromatin formation proteins
Other heterochromatin formation proteins
RhiXN_04061
Chromatin remodeling factors
NuRD complex
RhiXN_04061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
67026341
NCBI-ProteinID:
XP_043176297
UniProt:
A0A8H8NMM4
LinkDB
All DBs
Position
1:complement(join(1731524..1731888,1731945..1732096,1732143..1732507,1732557..1732930,1732977..1733051,1733110..1733227,1733287..1733399,1733447..1733519))
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AA seq
544 aa
AA seq
DB search
MDEDVQVISPSEHGSKRRVSYYYDSDVGLYSYGGAHPMKPYRMRMTHHLVAAYDMLQRMD
VFRPRRASQLDMTRFHTDEYIDFLGKVSPETAEELTGNGTRFLVGEDNPAWDGLFEFCSI
SAGGSISAAQRLNSGAADIAINWAGGLHHAKKREASGFCYVNDIVLGILELLRQFPRVLY
IDIDCHHGDGVEEAFYTTDRVFTCSIHKQVNFFPGTGDVHDRGYGPGKGYTANIPLMNGI
SDEQYASVFQPVIRHIIEWYRPGAIILQCGADSLSGDKLGVFNLSMEGHAACAQFVRSFN
IPTILLGGGGYTTKNVARAWTYETACALGIEHEIPRMLPYTDHLEWYGPRYRLDVESSNM
QNDNDTAYLEGVKRKVLEGLRDLPFAPSVGLQDVPRMDVGEAIGLVDEEDEESEMDEIDL
RLSHHVRNAHTVRSSSTSSSGEEQSYSSGDEAPESSRTPRSRPGNTNRTAPKRIFFRRET
DVIWNSHLRSGLGVGAAQHAWDDEEVESNVRAVENSFVDLGMGRKRRYDVGIMDSWKPGP
DDSP
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagacgtccaggtcatatctccctcggagcatgggtccaagcgccgagtttca
tactattatgatagtgacgttggcctctactcctacggcggagcccacccaatgaaaccc
taccgcatgcggatgacacaccacctggtcgctgcctacgatatgcttcagagaatggat
gtattccgaccccgtagagccagccagcttgatatgactcggtttcatacagacgaatac
atcgactttctcggcaaagtctctcccgaaacggctgaggagctgacggggaacggcact
cgatttcttgttggtgaagataatccagcgtgggatgggttattcgagttttgttctatt
tcagctggcggatcaataagtgccgcacaacgacttaactctggcgctgccgacattgct
atcaactgggccggcggtctccatcatgcaaagaagcgagaggcctctggtttctgctac
gttaacgacattgtccttggcattcttgaactcttgcgacaatttccccgggtactgtac
attgacatcgactgtcatcatggtgatggcgtggaagaggctttctacacaaccgaccgc
gtttttacttgctcaatccacaagcaagttaacttcttcccgggaactggtgatgtccat
gaccggggctacggtcctggaaagggatatacggccaacattccactaatgaatggcata
tccgacgaacagtatgcatccgtgttccagcctgttattcgccacatcattgagtggtac
cgaccgggagctatcatcctgcaatgcggcgcagactctttatctggtgataaacttggc
gttttcaatttaagtatggagggacatgccgcttgtgctcaatttgtacggtccttcaat
atacctacgatacttctaggcggtggcgggtacacaaccaagaacgttgctcgtgcatgg
acctacgaaaccgcatgtgcgcttggaattgaacacgaaattccacgaatgcttccctat
accgaccacctcgagtggtatgggccccggtatcgtcttgacgtagaaagtagcaatatg
cagaatgacaatgataccgcttacctagagggtgtcaaacgcaaggttttagaggggctc
agagatctaccttttgccccaagcgttggtctccaagatgttccgagaatggatgttgga
gaagccattgggctggttgatgaagaggatgaagagagcgagatggacgaaattgatttg
cggttgtctcaccatgtccgaaacgctcacaccgttcgctcgagctccacttcgtcatcg
ggagaagagcaatcttattcatctggggatgaagctccggagagtagtcgaactcctcgc
agtcggccagggaatacaaaccggactgccccaaaacgtatattctttaggcgagaaact
gatgttatttggaactcacatttgaggtcgggtcttggggttggcgcagcacaacatgcg
tgggatgacgaagaggtagagtcaaatgtccgggcagtcgaaaactcatttgtggacttg
gggatgggccgtaagcgaagatacgacgttggcataatggactcctggaagcctggccca
gacgacagtccttga
DBGET
integrated database retrieval system
