Rhizoctonia solani: RhiXN_04083
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Entry
RhiXN_04083 CDS
T09256
Name
(RefSeq) nucleoporin nsp1
KO
K14306
nuclear pore complex protein Nup62
Organism
rsx
Rhizoctonia solani
Pathway
rsx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
RhiXN_04083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsx03019
]
RhiXN_04083
Messenger RNA biogenesis [BR:
rsx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
RhiXN_04083
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
Baculo_PEP_C
DUF6244
OmpH
Nup49_C
AAA_13
EzrA
FUSC-like
MCPsignal
Motif
Other DBs
NCBI-GeneID:
67026363
NCBI-ProteinID:
XP_043176319
UniProt:
A0A8H8NPS7
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Position
1:join(1798956..1799046,1799111..1799560,1799689..1799790,1799842..1800057,1800119..1800372,1800465..1800661,1800719..1801061)
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AA seq
550 aa
AA seq
DB search
MAFNFGSAANSNSNTGSTTPAGGGLFGAAGASTTPFSGFSFGGAPSSSTTTGTTTGAAPT
GSGLFGGANAASAAKPSFSFGNPGATSTTNAAATGPPKTGGLFGATSSSTPAPTGGLFGA
SAPSTTSTAATAPKPLFGGFGAAATPSTTAPASGTEAPKTGGLFGAAPAASATAPKPSLF
APATSTPSTTDASKPTGGLFGSAPATGASATSATPSLGLFGAKPAEPAKPGEATTTAPST
ISLFGPKPTAGAATTPAAPPPPTGGLFGLTPAPAAKDDAAKNDAPKTDAAAPAAPSLGGG
LFGAKPAAATTPATATATANAPLTTPAGATAVPAIPPSALRGKSVEEIVNKWQEELETQT
KVFKRTAQEIEISNLYSAVQAAEAAQQGIDGTLENIEEQQKSVAAALDGYEQEMKKIYGS
DSLGVDVGPADGQREKNYAIAASLADQLDALARGLSTMIDSVNDLTSGPSAQTKDDPVAQ
ISAILNAHLESLQWIDGAVRDAEDRVKEIEGTRTGTIDNAGSRSALGMSTIGASSFSAST
AVPRRGRYGL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcctttaattttggctcagcggcaaatagcaactcgaacacaggctctaccactcct
gctggtggtggtctctttggagctgctggtgcgtcgacgacaccattcagtgggttcagc
tttgggggtgctccgtcaagctctactactacaggtactactacaggcgccgcacctaca
ggcagcggtctatttggtggggccaatgcagccagtgccgcgaaaccctcattttcgttt
ggcaatcccggtgcgactagcacaacaaacgccgctgcaacaggaccccccaaaaccggt
ggactctttggcgctacttcttcttcgactccagcaccaaccggtggattattcggcgct
tccgcaccatctaccacaagcaccgcggctaccgcaccaaagcctctgtttggtggattc
ggggccgctgcaacaccaagcaccacagcccctgcaagtggaacagaggcaccaaagact
ggtggactgtttggagctgctcctgctgcgtctgccactgcacccaagccttcgttattc
gcaccggctacgtccaccccatccacgactgatgccagtaagcccactggcgggctcttt
ggctcggctccagcaactggggcgtctgctacctctgctacaccgagcctgggtctcttt
ggtgccaaaccggccgagcctgccaagcctggcgaggcaacgactacagcaccttcaact
atttccttatttggtccaaaacctaccgctggagcagccacaactccagcagcaccacca
ccaccaacgggcggattatttggcctcacaccagcaccggcagcaaaagacgatgctgca
aaaaatgacgctcccaaaaccgatgcagcagctccagcggccccctcacttggtggtgga
ttgtttggtgccaaaccagctgcagcgactaccccagcgacggctacggctacggccaat
gcccctttgactacacctgcaggggccacagcagtaccagctatcccgccttcagccttg
agaggcaaatctgtggaagagatagtgaacaaatggcaagaggagctcgagacccagacc
aaggtattcaagcgtacagcccaagagatcgaaatatccaacttgtatagtgctgtgcaa
gctgctgaagctgcgcaacaaggaatcgatggaacactcgaaaatattgaagagcaacaa
aaaagtgtggcagccgcgttggatgggtacgagcaggagatgaagaaaatatatggcagt
gacagcttgggtgtggatgtaggtcccgctgatggacaacgcgagaaaaactatgccatt
gccgcctcgctcgcggatcaattagacgccctcgctcggggactgagcacaatgatcgat
agtgtcaacgaccttacgtctggaccatcagcacaaaccaaagatgatcctgttgctcaa
atctctgccattctcaatgcccatcttgagagtctgcaatggatcgatggtgctgtgcgg
gatgctgaagaccgcgtcaaagaaatcgaagggacccgaactggcactatagacaatgcg
gggtctaggagcgcactgggtatgagtaccatcggagcgagcagcttcagtgcaagtacg
gcggtaccccgtaggggacgttacggactgtaa
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