KEGG   Rhizoctonia solani: RhiXN_04157
Entry
RhiXN_04157       CDS       T09256                                 
Name
(RefSeq) RNA-dependent RNA polymerase
Organism
rsx  Rhizoctonia solani
SSDB
Motif
Pfam: RdRP AAA_12 AAA_11 DUF2418 AAA_19 AAA_30 UvrD-helicase AAA_16 AAA_22 nSTAND_NTPase5 ResIII AAA_29 SLFN-g3_helicase AAA DEAD Rad17
Other DBs
NCBI-GeneID: 67026437
NCBI-ProteinID: XP_043176393
UniProt: A0A8H8NLU3
LinkDB
Position
1:join(2004628..2005069,2005136..2005249,2005309..2005408,2005459..2005474,2005545..2005797,2005845..2006240,2006298..2006356,2006415..2006500,2006552..2007043,2007107..2007275,2007343..2007636,2007696..2007796,2007864..2008665,2008725..2009173,2009234..2009331,2009382..2009742,2009806..2009923,2009974..2010593,2011014..2011319,2011369..2011618,2011675..2011907,2011959..2012060,2012116..2012209,2012263..2012349,2012399..2012485)
AA seq 2042 aa
MAPAKFVLRAPLEPNEDSWVFELPSPLPAPRRGQGKLLQFSPEGLVLTMDQFSSNRVLHQ
DDPDQYILASFAGLRFKDNPPSAAANYIQRALTKGLFINGQQYRFYHHSNSQLRSRSCWL
RAASSDEELDRRIEKLCDVSKINNIAKRAKRIGLLFSGAEIDWDLNPALTKDIPDITIAE
ELFSDGCGLISRRFMQLLAKKKKIVHRGYRYTPSVIQIRYRGYKGVLAIHPQLDQAAQHH
VHFRDSMRKLKTGADNTFSVVDYSKPYQFARLNNDIIVLLSALGITNEMLKTKQDAYFKW
IESANKDMKRVFMDGLDEEQVQAQIRNAQVEEVNAFQKPETGKDRSRIFLLQSRFLFGVC
DPYGLLEEGEVHVRIMEPRKGATTLSNIDLMVVRNPCLHPGDILKLRAVHHTGLDHLVDC
IVFSGKGKRAAPAMSSGGDLDGDRFTVVWDPDIVPRTIAQSYDYPAAKTQVNLRITRKDL
ATHFANYNSMDLGRVASLHNKWARTLKGAMSPECQELNALHSQSVDGARIRIPERLIKPP
EVTDPFVLDVLITEAHIFSKRFLTTEAVHFDKLEYITAGDTLKTIMSLDGSAFPTLTENE
IVQLCRRFARRNMIDFRDYLYHVDFSALSANEKYALCSALDLNPESHPFIWNSLLRSDVV
PGFVLAEQNLDGPLPLQRLYSSKIQGRQAFFEYLKRATTDFMRKLIIIKTDDRFGVGVFI
RGRHSWDEDCKVNQDVLVHAFQPSVATGGQLAKPTKNGYMIYATDGIFQLFERHRANTFI
FLKSATEYSRKDVNASIALQKISENVRIGVIRGTQVETLEIHVISNRDKVAQEFFDLRFS
HVQTENVLPRFEREIKTYVPKSVKDLRVSRESSEDLNTSWAKEQIKELFSLEPLDFLEEI
KAIEDIKLEDLLQLAWTHNAHDYAFYVFEVMASRAPEDPSKLGSLQHWLGVDPAMVYALL
KVYMKQEGDSNVLRELDEVIVKSIVSSANTYSISAPMTIERLRHAVNALTFREFSEIMWL
TACSVRSLVLAADILATLTEVRTAVSSQSPSLEYAHRHLWAVCLDRVEDANSECPCDDTG
RPRRQRQAPAKVPLKSTGEERVVDAQVRPESGTDPRGRPIMDGVVSGIRKGELRIHLFHT
APVDFGNIEWYLYPAGDIVTSRAMLDSVVKLQMHPNYSTALHHLITGEETIYSADPASSD
ESEVELESGDEAKGTPEEPQKDWSIDDTGINWDRFNESQKSAILSVSYPLSLVWGPPGTG
KTTVVVTMLRLLLRSMPPGSRILMTASTHNAVDNVLGRFIKENEQHSLIAKDQLLRVATD
INKVHPSLRTYTMDAAIGGSMVDNRNLIKKAEKRVRDSTIVFTTCAGAGLGVLRRFKFQV
VLIDEASQITEAAALIPITKGCQKAVLVGDHVQLRPTVRPQAKALDYDVSLLERLYTGPE
RMGMSRIMLDTQYRFPAALARFPSKEFYNSSLRTGVPDDGFAEKFEQLAQTAFPWPRETE
RGPNSLNTNVFVSCKSEESYGRSSKENIGQAEVVVRTLKLLRTRRDATDESTPPPALTIA
ILSPYSRQVKLLKGMLDKDSTLSKNTEVHSIDGFQGREAEIIIFTTVRSNPSGDIGFLED
ERRLNVALTRAQLGRIIIGNEDTLGYAHSREQGDADTSTRRPRQSIPYPGTGPTTPLAKY
SERRPDLYSLSATHAFDWEAAKGNRPPPFTSALGSGAPDSLRKKLARAAADDDGMSGTVT
SPTKAARKRVVRKKSWRQRISEVPSAVNEWFWDTVTLSNLPLPPPETSGQVLGGLLHMIH
FVTRYSVLRSQKVEEGDWNDMQREIHIVAGLEQEDPEPWFSWTTPVTILLLLGSLLNTLY
LFTTIRTYHLHLRENMVDSPRAKMVHMDMTSAARDMDTQPTSSLVWRVIRGFGTHIASAW
RLILGSRKATGKSAANVQQLDVWNPGELELSIFTIYSPAHALLWMIFSSHTWFVALILMA
FISGQIFVLTRSYEGLLKDRRILQGEVMHEYNEKFVYPRVMPVRKDACVMTHEAEMVSWR
DR
NT seq 6129 nt   +upstreamnt  +downstreamnt
atggcaccggccaagtttgtcctacgtgctcctttagaacccaatgaggattcgtgggtg
tttgagttaccttctcccttgccggcaccccgccgcgggcaaggaaaattgcttcagttc
tcgcccgaaggcttggtgctgacaatggaccagttctcaagtaacagagttttgcaccag
gacgatcctgatcaatacatactggcttcgtttgctggattacgattcaaagataaccct
ccctcggctgccgcaaattatatccagcgtgcgctcacaaaaggcctgtttatcaacgga
cagcaatacagattctaccatcatagtaatagtcaactgcgtagtcggtcatgctggttg
agagccgcaagtagtgatgaagagcttgataggaggattgaaaagctctgtgatgtatca
aaaatcaacaatatagcaaaaagagcaaaacggattggtttgctattctccggcgcagag
atcgattgggatctcaacccagccttgaccaaagatatccccgatattactatagcggaa
gaattattctcagatgggtgtggattgatatccaggaggtttatgcagcttttagcaaag
aaaaagaagatcgtccatcgcggatatcggtacacaccatcagtcatccaaatcaggtat
cgcggttataaaggcgtcttggctatccatcctcaacttgaccaagccgctcagcaccac
gtacatttccgggactccatgcgaaagcttaaaacaggcgccgataacacattttcggtt
gtggactattccaaaccctaccagtttgctcgtttaaacaacgatataattgttttgctt
tcagcactaggtatcacaaacgagatgcttaaaaccaagcaggacgcatatttcaagtgg
attgaatccgccaacaaggacatgaagcgagtttttatggatggcttggacgaggaacag
gtacaagcccagattaggaatgctcaagttgaggaggtcaacgcattccaaaaaccagag
acagggaaggatcggtcacgaatatttctactccaatctcgcttcttgtttggagtatgt
gatccttatgggctgttggaggaaggagaagtacatgttcgcattatggaaccacgcaag
ggtgcaactactctatctaatattgacctgatggttgttcgaaatccctgtttacatcct
ggagatatccttaaactaagggcagtgcaccatacagggttggatcacctagtggattgc
attgtatttagcggaaaaggaaaaagagctgccccagctatgagttctgggggcgactta
gatggcgatcgttttactgtggtgtgggatccggatatagttcccagaactattgctcag
tcgtatgactacccagcggccaaaactcaagtcaatttgcgtatcactcgtaaagattta
gcaacccatttcgccaattataatagtatggaccttggacgtgtagcatctttacataat
aaatgggctcgaacgctcaaaggggctatgagtcccgagtgtcaagagctcaatgccctt
cactctcagagtgtcgatggtgctcgaattaggatacccgaaagacttattaaacctcct
gaggttacggatccgtttgttcttgacgttttgatcaccgaagcccatattttttcaaag
cgttttcttaccacagaggcggtacacttcgataagctggagtacataactgctggagat
accctgaagactattatgtcgttggacggctccgcgtttccaactttaacggagaacgag
attgttcagttatgccgacgtttcgcaagaaggaatatgatagactttagggattatttg
tatcatgtggatttcagcgctctgtcggcgaacgagaagtatgctctatgtagcgctctc
gatttaaacccagaatcgcacccgtttatttggaatagcttgctgagatcagacgttgtt
cccgggtttgtgttggcagaacagaacttagatggccctttgccactgcaaaggctgtac
tcatcgaaaatccaggggcgtcaggcattcttcgagtatctgaaacgcgccacaaccgac
ttcatgagaaaactcattattatcaagacggatgaccgattcggtgtaggcgttttcatt
cgcggccggcattcatgggacgaagattgtaaggttaaccaagacgtacttgttcatgca
tttcagccctcagttgcaaccggcggccagcttgctaagccaaccaagaatgggtatatg
atatacgctacagacggaatcttccagcttttcgagagacaccgagccaatacctttata
tttcttaaatccgccactgaatattcaagaaaagatgtaaatgccagtattgcattgcaa
aaaattagtgaaaatgttaggataggcgtaatccgaggaacgcaagtagaaaccctcgaa
atacatgtcatctcaaacagagacaaggtcgctcaagagttctttgatcttagattttcc
cacgtacaaactgaaaatgtcctgccacgatttgaacgtgaaatcaaaacttatgtacca
aagtcggtcaaagacttaagggtttcacgggagtcatcggaagacttaaacacgtcgtgg
gccaaagagcaaataaaagaactattttcgttggagcctcttgacttcttggaagagatt
aaggctattgaagacatcaaattagaggacctcttgcagcttgcttggacacataacgcc
catgattatgcattctatgtcttcgaagttatggcgtctcgagctccagaggatccaagt
aaattagggagcctgcagcactggcttggagttgaccctgccatggtatatgcgttacta
aaggtgtacatgaagcaagagggggactcgaacgttctgcgggaactagatgaagtgatt
gtgaagagtattgtttcttctgcgaacacctactccatatcggcacctatgaccatcgaa
cggcttcgtcatgcggtcaacgcgcttactttcagggaattcagcgagataatgtggcta
actgcctgttcggttcgctcccttgtcctggctgcagatattctcgccactcttacagaa
gtccgcactgcggtctcttcccaatcgccatcactcgaatatgcacaccggcacctttgg
gcggtatgtcttgaccgtgtagaagacgccaactcagagtgtccttgcgatgatactggg
agaccgcgccgccagagacaagcccctgcaaaagtgccgctcaaatccaccggagaggaa
cgcgtagtcgatgctcaagttcgacccgagagtggaacagacccacgaggccgccctatt
atggacggggttgtctcgggaattcgtaaaggggagctgcgtattcacctgtttcataca
gctcctgtcgattttggtaacattgaatggtacttgtacccggctggagatatagtcaca
tcgcgggccatgttggactctgttgtcaagctccaaatgcaccccaactattcgacggcg
ctacaccacctcatcactggcgaagaaaccatttattccgccgatccagcgagctcggat
gagtcggaagtggaattagagagtggcgacgaagcaaaaggcactccagaagaaccccag
aaggattggtcgatagacgatacaggtatcaattgggaccgtttcaatgaaagtcagaaa
tcggcaatactttcggttagctacccattatccttggtatggggtccacctggaacggga
aagactactgtcgtggtgacaatgctacggttgctgctgcgtagtatgccacctggctca
agaatccttatgacagcatcaacacataatgcggtcgacaatgtactgggccggttcatt
aaggaaaacgaacaacatagcctgattgcaaaagatcaactactccgagtcgcgaccgac
attaataaggtccacccatcacttcgtacatataccatggatgcggctataggaggcagt
atggttgataatcgaaacctcatcaaaaaggcagaaaaacgagttcgagattcaacgatc
gtattcactacttgtgccggagcaggattaggagtactgcgccggttcaagttccaggtt
gtcctgatcgatgaagcgtctcagataacggaagcggcagccctgatcccaataacaaaa
gggtgccaaaaggctgttctagttggggatcacgtacaacttaggccaaccgttagaccg
caagccaaggcactagactacgatgtatcactgttggaacgtctttatacagggccagaa
cggatgggaatgtcccgcatcatgcttgatactcaataccgatttcctgctgcactcgct
cgattcccctctaaagagttctataactcgagccttaggacaggggttcccgatgacgga
tttgctgagaagttcgaacagcttgctcaaacagctttcccttggccgcgcgagacggag
cgaggccctaattcgttgaataccaacgtatttgtctcctgcaagagtgaggagtcctat
ggacgttcgtcaaaagagaacattggtcaggcagaagttgtcgtacggaccctaaaacta
ttacgaacaaggcgcgatgcgactgacgaatctacccctcctcctgccttgaccattgcg
atcttatcaccttattcacgtcaggtcaagcttctaaaagggatgctagataaggattcc
actctttcgaaaaacactgaggtacacagcatcgacgggttccagggccgggaggcggag
ataattatattcacaacagtgcgtagcaatcccagcggggacattgggttcctcgaagac
gaacgtcggcttaacgtcgcattgacgcgagcccaactgggtcggattatcattgggaac
gaagatacgctaggctatgcccatagcagagagcaaggagatgcagacacgtctactcgg
cgccctcgccagagcattccgtacccgggaactggcccaacgacaccgctcgccaagtac
agtgaacgccgacctgatctgtattcgctcagcgccacccatgcattcgattgggaggct
gcaaaaggaaacagaccacctccgtttacctctgccttgggaagtggagcccccgacagc
ttgagaaaaaagttggcacgagcggctgctgatgatgatggaatgagcggtaccgtaaca
tcgccaaccaaggcagcaaggaagcgggttgtcaggaagaagtcgtggcggcagagaatc
tcagaagtaccctccgctgttaacgagtggttctgggacacagttacgctatccaacttg
ccacttcctcctccagaaacttctggtcaagtcctgggtggtctgcttcacatgatacat
tttgtcaccagatattcagttcttcgctctcaaaaggtagaggaaggtgactggaacgat
atgcaacgagaaatacatattgtagccgggctcgaacaagaggaccccgagccatggttc
tcctggacaacacctgtaacaattttattgcttttaggctcattgctcaatacgctttat
ctattcacgactattcgaacgtaccaccttcacctacgagaaaatatggtagattctccg
cgcgcaaaaatggttcacatggacatgaccagtgctgcccgtgacatggatacccagcca
acatcctcattggtttggagggttatacggggcttcggaactcatatagcctccgcatgg
cgcctaattttaggatccagaaaagcgacaggaaagagtgcagccaacgttcaacagcta
gacgtatggaatcccggtgaacttgaattgtcgatctttactatctattcgcctgctcac
gctcttctctggatgatattttcttcgcatacatggtttgttgccctcattctcatggca
tttatcagcgggcagatatttgtgcttacccgctcgtatgagggccttctcaaggatcgc
cgaatcctccaaggtgaagtaatgcatgaatataacgagaagttcgtatatccacgtgtc
atgcccgtacgaaaggacgcttgtgttatgacccatgaagcagaaatggttagctggcgt
gaccggtga

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