KEGG   Rhizoctonia solani: RhiXN_04204
Entry
RhiXN_04204       CDS       T09256                                 
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
rsx  Rhizoctonia solani
Pathway
rsx03030  DNA replication
rsx03410  Base excision repair
rsx03420  Nucleotide excision repair
rsx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RhiXN_04204
   03410 Base excision repair
    RhiXN_04204
   03420 Nucleotide excision repair
    RhiXN_04204
   03430 Mismatch repair
    RhiXN_04204
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsx03032]
    RhiXN_04204
   03400 DNA repair and recombination proteins [BR:rsx03400]
    RhiXN_04204
DNA replication proteins [BR:rsx03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    RhiXN_04204
DNA repair and recombination proteins [BR:rsx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     RhiXN_04204
SSDB
Motif
Pfam: RFC1 BRCT AAA AAA_30 Rad17 BRCT_2 RuvB_N nSTAND3 RNA_helicase AAA_22 AAA_16 AAA_5 AAA_33 Sigma54_activ_2 AAA_19 AAA_14 AAA_18
Other DBs
NCBI-GeneID: 67026484
NCBI-ProteinID: XP_043176440
LinkDB
Position
1:complement(join(2153541..2153693,2153745..2153853,2153904..2154055,2154108..2154270,2154325..2154444,2154498..2154634,2154705..2154843,2154896..2155033,2155088..2155135,2155184..2155269,2155315..2155440,2155499..2155552,2155604..2155790,2155844..2155963,2156015..2156296,2156350..2156517,2156573..2156971,2157029..2157322,2157375..2157398,2157450..2157471,2157539..2157635))
AA seq 1005 aa
MSSKQASTSDLRGFFGSQNGAKPDKKKTQILISDDEGDEPPAKSPNKPISKPAPLNTSEP
SRSPSPVQGRSTAKRKSKVLMSSDEEDNVRTAFKKAAVSAPSKQGDDVSTEPNGQVKPLA
GMSIVFTGDFEWERERLADATKKNGGEVLKQPGPTMSFIVVGKNVSQSKLQAIEKKKLKT
KTEQEFMELIKPKTTPMSEKPTPVLKSPPKKTNASRNRKSSPVEEEAPEHKPAPKAKKDV
PTKKRGSSPVASDDDTPAKPAIKKGGWNRPTGDQNFDAAMAAAKAAKASGPSAPGSKEVP
NGHPNALAGLTFVFTGELSSFSRDEAQDLAKRFGGRVTGQASSKTSFVVIGEGAGPGKMK
KVTSLGIKTLDEDGFLNLIGTREGKLDAKAQEKQKQEEEKIKQAARDMERREREAAKEAK
KGQSAGTARSAPAPPTAQLWTTKYAPQSLKDVCGNKALVDKLQLWLHEWQASAKAGFKKP
GKNGMNTSRAVLLAGPPGIGKTTSAHLVAKAEGYTPIELNASDTRSKKLLENSANINNTS
LDGWMAGQGSSNVAGMEITDRTVLIMDEVDGMSAGDRGGVSALISLIKKTKVPVICIAND
DKTPKLKSLLHSAFRLSFRKPEPQAIRSRILTIAFKEKMKIPANVIDQLIAGTQSDIRQV
LNMLSTWKLSHDTMDFDEGKELVRQNEKYSIKSPFEVTNQILGPYTFSATSRHTLNDKIE
MYFHDHAFENYLKTQPAKTSKLSGRDVALEQLKLMDRAASSISDGDLVDTMIHGTQQHWS
LMPLHAVTSTVRPASFLYGTGLGYGGPLQMTFPQWLGQNSKQGKLQRQLGDIQIRMRLKV
SGNKAEIRQSYIPALLPRLVRPLIEEGSNGVPTVIEIMDEYYLSKEEWDAMLELGIGPNK
GEDFASKISTATKTAFTRKYNSTDHPIAFHKPQEFGRPSTKIAAEAMPDHEDVLEVDDEP
EEEEEKQPKGKAKASEIEKDKLIKESKPKAAAKGVTKGRKAAAKS
NT seq 3018 nt   +upstreamnt  +downstreamnt
atgtcctcaaagcaagcctctacctctgacttgcgcggtttctttggatctcaaaatggg
gcgaaacctgataagaagaaaacccaaatactaatcagcgatgacgaaggcgacgaacct
cctgcgaagagtcctaacaaacccatctccaagccagctccactaaacacctccgagcca
tcgcgatctccttctcctgttcaaggccgatctactgcaaagcgcaaatccaaagttcta
atgtcgagtgatgaagaggataatgtacggacggcattcaaaaaagcagcagtttccgca
ccctcaaagcaaggggatgatgtatcaacagaacccaatggtcaagtaaaaccactagct
ggaatgtcaatagtctttactggggatttcgaatgggaacgtgaacgcttggcggatgcc
accaagaaaaacggcggagaggttctgaagcaaccgggcccgactatgtcctttattgta
gttggcaagaatgtcagccaatccaaacttcaagcgatcgaaaagaagaagttgaagacg
aaaactgaacaggagttcatggaattaatcaagccgaaaactacaccgatgtctgaaaaa
ccaactccggttcttaagtcacctccaaagaaaaccaacgcttcccgaaaccggaaatct
tctccagtcgaggaggaagccccagagcacaaaccagctcccaaagcgaaaaaggacgtt
cctactaagaaacggggatcttctccagtagccagcgacgatgacacgccggccaaacca
gctattaaaaaaggtggatggaaccgtccgacgggagatcagaactttgatgcagcgatg
gccgcagctaaagcggcaaaggcaagtggtcctagtgctccgggctcaaaagaagtaccc
aacggtcatcccaacgcacttgccggtttaacgtttgtattcaccggagagctaagcagc
ttttctcgtgatgaagcccaagatttggcgaaacggtttgggggtcgtgtcactggccaa
gcatctagcaagacatcgttcgttgtaattggagaaggggccgggccaggcaaaatgaag
aaagttacctccctcggtatcaagactctggacgaagacgggtttctcaatctcatcggt
actcgtgaaggcaaacttgatgccaaagcacaagaaaaacagaagcaggaggaagaaaag
atcaagcaagctgcgcgagacatggagcggcgcgagcgcgaagctgcaaaggaagccaag
aagggtcagagtgctggaactgcgcgctcagcgccggcaccacccaccgcgcaactttgg
acaacaaaatacgcaccacaatccttaaaggatgtgtgtggtaacaaagcacttgtggat
aaactacaactttggcttcatgagtggcaagcgagcgctaaggcaggattcaagaaacca
ggaaagaatggaatgaacacttcacgagccgttttgcttgcaggtccacctggtatagga
aagactacaagcgctcatcttgttgcgaaggcagaaggatacactcccattgagctaaat
gcaagtgacactcgtagtaagaaattactcgaaaacagcgctaatatcaacaatacatca
ctcgatgggtggatggccggtcaagggtcctccaatgtagctggcatggagattacggat
cgtaccgtgttgattatggatgaggttgacggaatgtcggcaggagatcgaggtggcgtt
agcgcgctgatttcacttatcaagaaaaccaaagttccagttatttgcattgccaatgat
gataaaactccaaagctcaagtcgttgcttcattcagcattcagactatcattcagaaaa
cctgaaccgcaagcgattcgctcacggattttgacaattgcgttcaaggagaagatgaaa
attcccgcaaacgtcatagaccaacttatcgctggtactcagtcagacatccgacaagtt
cttaacatgctatcgacatggaagctatctcatgacactatggacttcgatgaggggaag
gaacttgtacggcaaaacgaaaaatacagcatcaagagcccatttgaggtcacaaaccag
attttaggcccatatacttttagcgcaacctctcggcatactttaaacgacaagattgag
atgtacttccatgatcatgctttcgagaactacctcaagacgcaacccgcgaaaacttcg
aagctatctggcagagatgttgcactggagcaactgaaacttatggaccgagccgcatct
tctatttcggatggagatttggttgataccatgattcatggaacacagcagcattggtcc
ctcatgccgcttcacgccgttacatcgacagttaggccggcttcgttcttgtatggcact
ggcctcggctatggtggccccctgcaaatgacattccctcaatggcttggccagaactct
aaacaaggaaaactacagcgacaactgggagatatccaaatacgaatgcgcctgaaagtc
tctgggaacaaagcagaaattcgacaatcatatatcccggccctactgccccgtttggtc
cgaccgcttattgaagaaggctctaatggcgtcccaactgttatcgaaataatggatgag
tactacttgtccaaggaggaatgggatgcaatgcttgaattgggcattggccccaacaaa
ggcgaagattttgccagcaagattagcacagcaaccaagacagcatttacacgcaagtat
aactcgacagaccaccctattgcttttcacaaaccccaagaatttgggaggccgagcacg
aaaattgcagcagaggctatgccagaccacgaagatgtcctcgaggtcgacgatgagccc
gaagaggaagaggagaaacaacccaaaggcaaggccaaggcgtctgagattgagaaggac
aagcttatcaaagaaagcaagcccaaggcggcggccaagggtgtaaccaagggacgcaaa
gcggctgctaagagctaa

DBGET integrated database retrieval system