Rhizoctonia solani: RhiXN_04314
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Entry
RhiXN_04314 CDS
T09256
Name
(RefSeq) chromosome transmission fidelity protein 1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
rsx
Rhizoctonia solani
Pathway
rsx03022
Basal transcription factors
rsx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RhiXN_04314
09124 Replication and repair
03420 Nucleotide excision repair
RhiXN_04314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsx03021
]
RhiXN_04314
03036 Chromosome and associated proteins [BR:
rsx03036
]
RhiXN_04314
03400 DNA repair and recombination proteins [BR:
rsx03400
]
RhiXN_04314
Enzymes [BR:
rsx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
RhiXN_04314
Transcription machinery [BR:
rsx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
RhiXN_04314
Chromosome and associated proteins [BR:
rsx03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
RhiXN_04314
DNA repair and recombination proteins [BR:
rsx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
RhiXN_04314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
DEAD
ResIII
nSTAND3
Motif
Other DBs
NCBI-GeneID:
67026594
NCBI-ProteinID:
XP_043176550
LinkDB
All DBs
Position
1:complement(join(2461413..2461730,2461788..2461968,2462019..2462125,2462176..2462268,2462332..2462904,2462976..2463223,2463274..2463383,2463435..2463531,2463584..2463707,2463757..2463975,2464019..2464234,2464284..2464361,2464415..2464447))
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AA seq
798 aa
AA seq
DB search
MCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQFYPTKRKLIYCSRTVPEIEKALS
ELKRLMAYRISQAETPEQRIKEEAFTGLGLTSRKNLCLNPEVSKEKKGKLKRDGMTRATI
RYVLGMRRVIVFSPSPHTSHYPQGLNDMEEGALIPAGIHTLADISNMGRERTTCPYFTIR
RMMPFVDVIIYSFHYLLDPKVAEQVSKELSKDSIVVFDEAHNIDNVCIESLSIDLTRPML
EAAARSVTRLGEKIDEIKATDANRLQEEYEKLVEGLQETENDRAEDVVMANPVLPDDLLK
EAVPGNIRKAEHFIAFLKRLVEYLKACYPRLSRIMSNIVVTKTRMRVLHVVAETPLSFLQ
HLKDITYIERRPLRRSLIRTLELTQIDEYSSLQKVANFATLVSTYEKGKHIQAALELRSS
VNLGFLLILEPFEGENTTVPNPIFHFTCLDPSLAIKPVFERFSSVVITSGTISPLDMYPK
MLQFTPVVQETYPMTLTRNCFLPLVITRGSDQVAISSRFEVRNDPSVVRNFGSILIEYCK
IVPDGVVAFFPSYLYMESIVAAWHDMGILSEVWKNKLIFVETPDANETSVALENYRKACD
NGRGAVLLSVARGKVSEGIDFDHNYGRAVIMFGIPYQYTESRILKARLEYLRDAYRIRES
EFLGFDAMRNAAQCVGRVLRGKTDWGLMIFADKRFARADKRSKLPRWINQYITESASNLS
TDMALVQSKLFMRTISQSHDVEQTGVSLWTKEDIEAHQAKLRAMDPADVEMNEDKDEEDE
YEGGISDAVLANVDLDDM
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacctcaagaggactctagacgctacaggccactgtgtcctcgaaatgccttca
ggtaccggaaaaactgtctccttgctatcacttattgtctcttatcagcaattttatcct
acaaaacgcaaattaatatactgctcccgaacggttcccgaaattgagaaagcgctatcc
gagctgaaacgtctcatggcttaccgcatttcgcaagcagagacgcccgagcagaggatc
aaagaggaagcattcactggacttggattaactagccgcaaaaacctgtgcttaaaccca
gaagtatcaaaagagaaaaaagggaagttgaaaagggacggaatgacccgggcaaccatc
cgctatgtgcttggcatgaggcgagtaatagttttctcaccttcgcctcatacttcacat
tatccacagggcctcaacgatatggaggaaggggctctcatcccagctggtattcacacc
ttggctgatatatccaatatgggtcgtgagcgaactacatgtccttactttactatccgt
cgaatgatgccatttgtcgacgtgatcatttattccttccattaccttttggaccccaag
gttgctgagcaagtctcaaaagagctttcaaaggattctatcgttgtgtttgacgaggca
cacaacatagacaatgtgtgtattgaatcacttagtattgacctcaccagaccaatgtta
gaagctgcggcgcgcagtgttacacgacttggcgaaaaaattgacgagattaaggccaca
gacgctaacagattacaagaggagtacgaaaaacttgttgaagggttgcaggaaacagag
aatgaccgtgcagaggacgtggtcatggctaaccctgtccttcctgatgatcttcttaag
gaagcagttccaggcaatatcagaaaagctgaacattttattgcattccttaaacgattg
gtcgagtacctcaaggcatgttatcccagattatcccgaattatgtctaacattgttgtt
actaagacccgaatgcgtgttttgcacgttgtcgctgaaaccccgctctcgttcttacaa
catttgaaagatatcacgtatattgagaggcggccattacggcgatcgctgatacggacg
ctagagctcacacaaatagatgaatactcttctcttcaaaaagttgcgaattttgcgaca
ttagtgtcaacgtatgagaaaggtaaacatattcaagctgctctcgaactgcgctcatca
gtaaatctagggtttttgcttatccttgaaccgttcgagggtgagaacaccaccgttccg
aatccaatttttcactttacttgcctcgacccatctctggccatcaaaccggtatttgag
cgcttcagtagcgtcgttatcacatccggtaccatctcccccttggatatgtaccccaaa
atgttacagttcacacctgtcgtgcaagaaacgtacccaatgacactaacccgcaactgc
ttccttccactcgtaattacacgtggctccgatcaggttgcaattagcagccgatttgag
gtccgcaacgatccgagtgtggttaggaattttgggagtattttgatcgagtattgtaag
attgtccccgatggtgttgttgctttctttcccagctatttgtatatggaatcgatcgtt
gctgcctggcatgacatgggcatcttgagtgaggtatggaaaaacaagcttatttttgtg
gaaacgcccgatgcaaatgagaccagcgtggcgctggagaattatcgtaaagcttgtgat
aatggccggggtgctgttctactttccgtcgcaagaggcaaggtttcagaaggaatagat
tttgatcacaactatgggcgagccgtcattatgttcggcatcccataccagtacacagaa
agtaggattcttaaggcacgactagagtatctccgagacgcataccgcattagagaatcg
gaattcctcggctttgatgctatgcgcaatgctgcccagtgtgtcgggcgtgtcctgcgt
ggtaaaacggactggggattaatgattttcgcggacaagcgatttgcacgagccgacaag
cgttctaagcttccccgatggatcaaccagtacattacggaaagtgcctcgaacctttct
accgatatggcgctagtacaatccaaactattcatgcgtacgatttcccaaagccatgat
gtcgaacaaactggagtatctctttggacaaaggaagatattgaggcgcatcaagccaag
ttgcgtgctatggacccagccgatgtcgaaatgaatgaggacaaggatgaggaagatgaa
tacgagggcggaatttccgatgccgttctcgcaaacgtggatttggatgacatgtaa
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