KEGG   Rhizoctonia solani: RhiXN_04319
Entry
RhiXN_04319       CDS       T09256                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 12
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
rsx  Rhizoctonia solani
Pathway
rsx03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    RhiXN_04319
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rsx03009]
    RhiXN_04319
Ribosome biogenesis [BR:rsx03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    RhiXN_04319
SSDB
Motif
Pfam: Utp12 Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR5 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd EIF3I WD40_2 Beta-prop_WDR3_2nd Beta-prop_VPS8 Beta-prop_Nup120_160 DUF7302
Other DBs
NCBI-GeneID: 67026599
NCBI-ProteinID: XP_043176555
UniProt: A0A8H8STR2
LinkDB
Position
1:complement(join(2474537..2474739,2474835..2475015,2475075..2475623,2475677..2475766,2475826..2476968))
AA seq 721 aa
MRDKRAKNKGAKPPTDRAVGTSALAQPSLSSPASRLSSFSPDGGLFAFLSLAVDKHRLRV
YDVTTGSAVADHTFDAARVTALVWGTFELTDETKASKKRRKRKSQTTNDAPEAPSAIQLV
ALGLSDGSTILYSPTQGAVVRTLSNPAHTAPITSLAPHNDSPSHLWAASEDGTIRYWNIP
TSTSKDVATSTPCAALAPRPGITETKDGATHLLTAQTTIQLLPISSDGTAQTELITVPGH
ASPVMALVWDKNSSGPAQRFISAAEDDRVVSVWDAASGKMVASVPLDSEARHVTFGVESE
VSILLALAVSGKVSLYTLPEGVKSKGVSTLSPQSVINVEYAGKKGGDPTAADVVAVSFVP
ENQGKVVLARLVGVKPVFDTVDYRDESGKILPEIKLTHKSANAGLTPDTNGVVPAKHYAE
PQSLTIHNGIELAQNPSEVLPATTAADLDVELAEITLSERNKVLADQPSSTSGQKRRHDS
PSDEPEPSTSKSNKKGLQVPAHSLSRTLTQALHSGDNALLETCLAHGDANLIRNTVLRLP
PTLCVPLLQACVERLGRGARGEKGGGAGASAQRGTSLIRWVRAVLICHSGFLMTIPDLVS
RLASLHATLGARLALQDRLLALNGRLDLVLSQIDVQSAPRAAIDEEIIMKKKKVHEDEDE
DEDDEEGSVEEIGLGSGDEEEDDDEDEDDEDSDEDGPKINGFIDDEAEEDYSEDEESSAE
E
NT seq 2166 nt   +upstreamnt  +downstreamnt
atgcgcgacaaaagggcaaagaacaagggggctaaaccccccaccgacagagctgttggc
acttcagcgcttgcgcagccgtcattgtcttcaccggcttcacgtctatcgtcattttcg
cccgatgggggattatttgcgtttctgtcactcgctgtggacaagcaccgactgagggta
tacgatgtgaccaccggaagtgcagttgcggaccatacatttgatgctgctcgggtaacg
gccctcgtatggggaacattcgagctcacagatgaaaccaaggccagcaagaaacgaagg
aaacgaaagagccaaaccacaaacgatgctcccgaagctccctcggccatccagcttgtc
gctcttggcttgtcagatgggtccactatactctactcccccacccaaggtgcggtcgtc
cgtacattatccaatccggcacatacagcgccaatcacctccctcgctccgcataacgat
tcccccagtcatctctgggcagcctcggaggatggcacaataagatattggaatattcca
acctctacttcaaaagatgtcgccacttcgactccgtgcgcggcattagcaccccgccca
ggcatcacagagaccaaggatggcgccacccatttgcttacggcccaaactactatccag
ctcctacccatatcgtccgacggaacagcacaaaccgaactcataactgtacccggtcac
gcatcccccgttatggctcttgtctgggacaaaaattcatctgggccggctcagcgcttc
atttctgcagctgaagacgatcgggtggttagcgtttgggatgccgcaagcgggaaaatg
gttgcctcggttcccctcgattcggaggcacgtcatgttacattcggagtcgagtctgag
gtctcaatcttacttgcactcgctgtttccgggaaagtatctctctacactttgccagaa
ggcgtcaaatcaaagggagtctcgaccctttcacctcagtcggttattaatgtcgaatac
gctgggaagaagggcggcgaccccacggcagctgatgtcgtagcagtttcatttgttccc
gagaatcaaggcaaagttgttctggcacggctagtaggagttaaacccgtgtttgacaca
gtggactaccgggatgagagcgggaagatcctgcccgaaataaaattgacccacaaatca
gctaatgctggtctcactcccgacaccaacggcgtcgttcctgccaaacactacgctgag
ccccaatctcttaccatccataatggtattgagctggctcagaatccgtccgaagtcctt
cctgcaactactgctgccgaccttgacgtcgaactcgctgagattacccttagcgaaagg
aacaaggttcttgctgaccagcccagctccacctctggccaaaaacgaagacatgactct
ccctctgacgagcctgaaccctctacatccaaatccaacaaaaagggactccaagttcca
gcccattcgctctcccgcactctgactcaggcccttcactctggagataatgctcttctt
gaaacatgccttgctcacggtgacgccaacctcattcgaaataccgtactccgtctgcca
cccacgctctgtgttcccttgctacaggcgtgcgtcgaacgactagggcgaggtgcgagg
ggtgagaagggaggaggtgcaggtgcgagtgcgcaaaggggtacctcgttaatacgatgg
gtcagggcggtcctaatttgtcattctgggtttctgatgacgataccggacttggtttcg
aggctggcttcgttgcatgctactcttggtgctcgattggccttgcaagaccgattgctg
gcccttaacggtcgcttggacttggttctttcgcagattgatgttcagtctgctcctcgg
gctgctatagacgaagagataattatgaagaaaaagaaagttcatgaggatgaggatgag
gatgaggacgatgaagaagggagtgtggaggagattgggcttgggagtggggatgaggag
gaagacgatgatgaagacgaagatgatgaggatagtgacgaagatggccccaaaatcaat
ggcttcatcgatgatgaagctgaagaggactacagtgaggacgaggagagtagtgccgaa
gagtag

DBGET integrated database retrieval system