Rhizoctonia solani: RhiXN_04325
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Entry
RhiXN_04325 CDS
T09256
Name
(RefSeq) THOC7 domain-containing protein
KO
K13176
THO complex subunit 7
Organism
rsx
Rhizoctonia solani
Pathway
rsx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
RhiXN_04325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsx03019
]
RhiXN_04325
03041 Spliceosome [BR:
rsx03041
]
RhiXN_04325
Messenger RNA biogenesis [BR:
rsx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
RhiXN_04325
Spliceosome [BR:
rsx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
RhiXN_04325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
PAM2
NagJ_C
Motif
Other DBs
NCBI-GeneID:
67026605
NCBI-ProteinID:
XP_043176561
LinkDB
All DBs
Position
1:join(2487900..2487948,2488001..2488288,2488353..2488497,2488560..2489028)
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AA seq
316 aa
AA seq
DB search
MSDAVPPLPLLTQEQEDATLHARVHNVNNDKAINKLMKRLQAYLARNFAYISYQNNPDPS
LATLVTLEEVENARDEFLVELASFRLSMRKNTLVIDAEGRQAQQYKDEIESIAREHEATK
LDIENLRLTLEQEQTFRKRKQEYDLVAEKINDYPSRTELTADIAALDDELSTIRAAREDH
NENLAARRAVLDTLVQQIHSLRQMGKPQDGSDPTPGSAELAHGTHQLNPAARPFVPGHSV
GETPTPGPGTPLAPAPAVAKPESDDDIEMGEVAEEAEAGEVEDRDKWSKPKSKSRRPDDE
MEEGEASDGTGEPIDS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgccgttcctccccttcctctacttacccaagaacaagaggatgcaaccttg
catgcccgtgtgcacaatgtaaacaacgacaaggccatcaataaactcatgaagcgcctc
caggcatacctggcacgcaactttgcatacatatcctatcaaaacaatccagacccctcc
ctggctactctagtcactctcgaagaagtcgagaacgcgcgtgatgaattcctggtcgag
ttggcatcatttaggctgagcatgcggaaaaacactctcgtgattgatgcggaaggtcgt
caggcgcagcaatataaagatgaaattgagagcattgccagggagcatgaagctacgaag
cttgacattgaaaatctacgcctcacactggaacaagaacagaccttccgaaaacgtaaa
caagaatatgacttggtggctgaaaagataaatgactatccgtcacgaacggagcttacg
gccgacattgctgcgctggatgacgaattgtctactattcgggctgcacgcgaggaccac
aatgagaatctggcggcacgccgtgcggtacttgacactctggttcaacaaatccactct
cttcgacagatgggcaaaccccaagatggctctgacccaacaccaggttctgccgagcta
gcgcatggtacccaccaattaaatcccgctgcacgcccgtttgtgccgggtcactcagta
ggtgaaaccccgactccaggcccaggaacaccacttgcccctgcaccagctgtggcaaag
cccgaaagtgatgatgatatcgagatgggggaggtggcggaagaggcagaggcaggcgaa
gtggaggacagggacaagtggagcaaacccaagtccaaatctcggaggccggacgacgag
atggaagagggtgaggcatcggacggaactggcgagccaatagactcttga
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