Rhizoctonia solani: RhiXN_04400
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Entry
RhiXN_04400 CDS
T09256
Name
(RefSeq) DEAD/DEAH box helicase
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
rsx
Rhizoctonia solani
Pathway
rsx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
RhiXN_04400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsx03041
]
RhiXN_04400
Enzymes [BR:
rsx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RhiXN_04400
Spliceosome [BR:
rsx03041
]
Complex A
U2 snRNP components
U2 related factors
RhiXN_04400
Complex B
RhiXN_04400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
KH_12
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
67026680
NCBI-ProteinID:
XP_043176636
UniProt:
A0A8H8NMF9
LinkDB
All DBs
Position
1:complement(join(2673557..2673670,2673739..2673823,2673877..2673917,2673978..2674564,2674626..2675271,2675326..2675526,2675580..2675856,2675912..2676139,2676193..2676676,2676738..2677467))
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AA seq
1130 aa
AA seq
DB search
MARYSRSPSPDYKRRKSYHNSRGDSPSPTRRHHQARERERDSHRDRERERDRPRDRDRER
ERDRDRDYRDRDRDRDRRRDDRDYDRRRDRTHREKDRDRDRDRESERDRNDRGRKRSRSL
SRDAPPSAPTETSKQSTPAPAPPPEQSTSTSTPAPAPTLAPVADVSTAPIPEPIAASVSA
TTTAINSAAATPPATNTTKPSGPEDEKMRAKRERLEAWKKQQALAKEQKAKGGDKASTTN
GTSGVRPTGALSRPGGIGIKGLPQRPEAGKSLSKAARSMDDTTESNRKLVKLGDMPAVDL
SMDTNANGIGENLEAEDDDEPEPMQIDSTNPTPAVEEEEEEDPLDAFMSGVKEEVKKVNA
EDRKRMAGNGEQLGITAEDAEDDVEETRDVDELDATELRPEDILALAAKKAKKKDLAVVD
HDKIKYEPFRKAFYHPPPDVAAMTDDEADLLRLSLDGIKIRGLDCPKPVTKWSHCGLPSS
CLDVIKRLGYTAPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLLPLFRHIKDQRPLET
MEGPMAIVMTPTRELAVQIHRECKPFLKVLNLRAVCAYGGSPIKDQIAEMKKGCEIIVCT
PGRMIDLLTANSGRVTNLRRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSAT
FPKQMDSLARKILRKPLEITVGGRSVVAAEIDQIVEVRTEESKFNRLLEILGQTYNEDSE
ARTLIFVDRQEAADNLLRELMRKGYVCMSLHGGKDQVDRDATIADFKAGVVPIVIATSVA
ARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITPEQERYSVDIFRALE
ASKATIPSDLEELAKGFLDKVKAGKAQSYVGAGFGGKGLDKFDQERDAKERAQRAAYGEA
IEEKPKVEEEASTPTTKEDDMTFGNFKVEIRKGPAPDSSKTVSTPAGAAARWTKAKDDEA
KVMSNLKAAQEAAARITSKDSAAYRQAQSVVAKFNAQLRATKLMAQSQSQLDDAGRKPKD
PDATDFHAIIPINDYPQKARWRVTNKETMVQLIDMTGASVTNKGSYILRTGQRTSSRRAP
ETHLLVESNDEFRVEQAVREIKRLLIEASTAALAAEQRNPTATAGRYSVV
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggtattcacgctcaccttccccagattacaaacgacgtaagtcatatcataac
tctcgcggagactccccgtcgccgaccaggcgccatcaccaggcaagggagcgtgagcgg
gacagccaccgcgaccgcgagagggagagagaccgacctagggaccgtgacagggaaagg
gaaagggaccgggaccgagactaccgcgatagagatagagatagagacaggcgtcgtgat
gaccgcgactacgatcgtcggagagaccgaacccatcgagagaaagacagagatagagac
cgggaccgagagtctgaacgggaccgcaatgaccgtggtaggaagcgctctcgctcgctc
tctcgcgatgccccaccctcagcgcctaccgaaacatccaagcagtctactcctgctcct
gctcctcccccagaacaatcaacatctacttcaacaccagctccagcacctactctcgca
cctgtggcagatgtttctactgctcccatacctgaaccaattgctgcttctgtatcagca
actacaaccgcgatcaatagcgccgctgcgactccgccagccaccaatacgaccaaacca
tctggacccgaagacgaaaaaatgagagctaaacgtgagcgcctggaggcttggaagaaa
cagcaggcgctggcgaaagagcaaaaagccaaaggaggtgataaggcatctaccaccaat
ggcacttcaggagtgaggcctactggggctctgagtcgtccaggtggaataggcatcaaa
ggtttgcctcagcgacccgaggctggcaagtcactttctaaggctgctcgctccatggac
gatactacggaatccaatcgaaagctcgtcaaactcggggatatgcctgcagttgacttg
tctatggatacgaatgcaaacggcatcggtgaaaatttggaagcggaggatgacgatgag
cctgagcctatgcaaatagattctacaaaccctactcctgctgtcgaagaagaggaagaa
gaggacccgctggatgcctttatgagtggtgtgaaggaagaagtgaaaaaagtcaatgct
gaggaccgaaagcgcatggcaggcaatggagaacaacttggtatcaccgcagaggatgcg
gaggatgatgtagaggagacacgagatgttgacgagcttgatgctactgaacttcgcccg
gaagatattctagcactcgctgccaaaaaagccaagaaaaaggatctggcagttgttgat
cacgacaagatcaagtacgagccattccgaaaagctttctatcatccacctcctgatgtt
gcggccatgactgatgatgaggctgatcttttgcgactgagcctcgatggcatcaaaatc
cgtgggttggattgccccaaacccgtcacaaaatggagccattgtgggttacctagtagt
tgtctggatgtgatcaaacgcttaggttatactgccccgacttccattcaatcacaggcg
attccagcaatcatgtctggtcgcgatgtaattggcgttgcgaaaacaggctctggcaag
acgattgcttttttgttacctctattccggcatatcaaagatcagcgacctttggagact
atggagggcccgatggcaattgtcatgacaccaactcgagagcttgctgtccaaattcac
agggaatgcaagccattccttaaggtcttgaaccttcgtgctgtgtgcgcttatggtggc
tcgcctatcaaagaccaaatcgcggagatgaagaagggatgcgaaattattgtatgcacc
cccggcagaatgattgacctgctcaccgcgaactcgggtcgtgtgactaacttgcgccgg
gtaacataccttgtcttggacgaggctgatcgtatgttcgacatgggatttgagccacag
gttatgaaaattgtgaataacattcgaccagataggcagactgtcctgttttcggccaca
ttcccgaaacagatggattcattggcgcgaaaaatattacggaaacctctcgaaatcacg
gtcggaggtcgcagcgttgtcgcagccgagattgatcaaattgttgaagttcgcacggaa
gagtccaagtttaatcgcctcctcgaaatcctcggccagacctacaatgaggatagtgaa
gcccgaaccctaatctttgtcgatcgtcaagaggcagctgataatctcttacgcgagctg
atgcgcaaaggctacgtgtgcatgtccttacacggcgggaaagatcaggtggacagagac
gcaactatcgccgacttcaaagctggagtagtacccatcgttattgctacttcggttgca
gcgcgtgggctcgatgtgaagcaactcaagttggtaatcaactatgacgcaccgaaccat
atggaagattatgtacaccgtgcgggccgaacgggacgagctggaaacaagggcacatgc
gtaaccttcattactcccgagcaggaacggtattccgtcgacatattccgagcgctcgaa
gcaagtaaggctaccattccctcagacctggaagaactggccaagggtttcctcgacaag
gtcaaggccggcaaggcacaaagttatgtgggagctgggtttggcggcaagggcctagac
aaattcgaccaagagcgcgatgccaaagagcgggctcaacgggctgcttacggtgaagca
atagaagagaagcccaaggtcgaggaggaagctagcaccccaacgacgaaagaggacgac
atgacatttggaaatttcaaggtcgagatcagaaagggaccggcgcccgactcgtccaaa
acagtatcaaccccagctggggcggctgcccgatggacgaaggccaaggacgacgaagcc
aaagtaatgtcaaatctcaaggcggctcaggaggctgcggcgagaatcaccagcaaggat
tcggcggcctacagacaggcccagagcgttgtagcaaaattcaacgcgcaactccgcgct
acgaagctcatggcacaaagtcagtctcagctcgacgatgcggggcgcaaaccaaaggat
cccgacgcgacagatttccacgccattatccccatcaacgactatcctcaaaaggcgcgc
tggagagtgacaaacaaggaaactatggtccagttgatcgatatgaccggtgcttccgtc
acaaacaaaggttcgtatatactacgaaccgggcaaagaacctcctctagaagggccccc
gaaactcacttgttggtggagtccaacgacgaattccgggtcgaacaggctgtgcgcgaa
atcaaacgactcctcatcgaggcctcaactgccgcgcttgcagcagaacagcggaacccc
acggctacagctggtcgttacagtgtggtttaa
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