KEGG   Rhizoctonia solani: RhiXN_04403
Entry
RhiXN_04403       CDS       T09256                                 
Name
(RefSeq) small nucleolar ribonucleoprotein complex subunit Dip2
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
rsx  Rhizoctonia solani
Pathway
rsx03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    RhiXN_04403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rsx03009]
    RhiXN_04403
Ribosome biogenesis [BR:rsx03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    RhiXN_04403
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WDR55 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Utp12 ANAPC4_WD40 DSE1_N Beta-prop_NOL10_N Beta-prop_VPS8 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st ASA1 NBCH_WD40 Beta-prop_TEP1_C CFAP251_N WDR90_beta-prop_4th Beta-prop_Aladin PEP5_VPS11_N Beta-prop_WDR19_1st Beta-prop_WDR41 WDR54 Beta-prop_IP5PC_F Beta-prop_Nup120_160 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_ACSF4 RMC1_N WD40_RFWD3 TRM82_WD Beta-prop_WDR11_2nd Beta-prop_pof12 Beta-prop_RIG_1st PROPPIN Beta-prop_LRRK2 WD_LRWD1 Beta-prop_WDR75_2nd DNAI3_WD DIKK1-2-4_C-subdom1 RelA_RIS
Other DBs
NCBI-GeneID: 67026683
NCBI-ProteinID: XP_043176639
UniProt: A0A8H8NPG5
LinkDB
Position
1:complement(join(2681601..2681792,2681884..2682030,2682085..2682201,2682258..2682542,2682596..2682727,2682779..2682997,2683063..2683236,2683286..2683584,2683640..2683817,2683867..2684250,2684313..2684637,2684693..2684958,2685006..2685116,2685166..2685201))
AA seq 954 aa
MVRSYQRHGPTQAFGMICSNSSNAVYDGRYAYVPALEDVLVWDVKRGQMLAMWHETGHRA
EVTCIRRSPVKETFAVGYTDGSIRLWDSASGSVTVVFNGHRKAVTALAFDGTGTRLASGS
QDTELIVWDIVAETGLYRLRGHRDQITSISFIPPSFAANAPSSSTSENSTYLVTVAKDTF
LKLWNLSTQHCIQTQVAHRSEIWSMDIDSSDRKLLILTGSGDGEVKAWSLDGVILQNGLV
QNENGEISKPIQPAGSLPLSTKHRVAQISRHPHLPYLAIQSHDRSVEVFRIRTESEALKK
QARRKKRAKEKANKANLKGKTTDVEMDNGQEETEAGVISLEDLFTPYLIVRASGKIRSFD
FPEGTSGSETKGIQIMVSLATNALEVYNIPPPVKSKEQPEAARTFTLDLPGHRTDVRAVA
LSSDDQLIASASNGLLKVWSVQSTACIRTFDCGYALCCIFLPGDRQVAVGTKSGEIQVFD
LASSALVQSIQAHEGAVWSMHVRSDNIAMVSGSADKDVKFWEFERKTEEGSKFVGRVVTI
VHVRTLKMSEDVLSVRYSPNSKLLAVALLDSTVKVFFQDSLKFFLSLYGHKLPVLGMDIS
SDSKLIITCSADKNIKIWGLDFGDCHRSLFAHDDSVMQVAFQRNTHYFWSVSKDKMLKYW
DGDKFEQIQRLDGHHGEVWALATSNDGKFVVTGSHDKSIRIWEETEEPLFLEEERERELE
QLHDDALADTLNRPSHAIGALANGDEPNETAEVETGVVEKQTADTLMAGERIMEALDIAD
SERAAALAYEEQCLGLTEEEVARHVLRVVEKVPGPALFDALLVLPFTKVVSMLTYLDEWA
KRDISTAMTSRILVFLLRTHHHQIVANKVLRTTLLALRNHLRGALKIHKDEVGYNLAALR
IIRRRDDLNRVSEFYETTIGDTKSMALSLPDEATIRKQIQAADGKKRKRVNIVA
NT seq 2865 nt   +upstreamnt  +downstreamnt
atggtccgttcataccagcgccatggcccgacacaggccttcggtatgatatgtagtaat
tcttccaatgcggtatatgatggtcgatatgcatatgtgcccgctctggaagatgttttg
gtttgggatgtaaaacgagggcagatgcttgctatgtggcacgagacaggccaccgagcg
gaagtaacatgtattcgacgatcaccagtgaaagaaacatttgcggttggttacacagat
gggtcaatcagattgtgggactctgccagtggtagcgtcactgtagtcttcaatggacac
aggaaagctgtcacagcactcgcctttgatggaactggaaccaggttggcgtctggctct
caagataccgagctaatcgtatgggatattgtagccgaaacaggcctttaccgactgcgc
ggccaccgtgaccagattacatctatcagtttcatccccccttctttcgcggccaatgct
ccctccagttcgacttccgaaaactcaacatatttggtgactgttgccaaagatacgttc
ctaaaattgtggaatctttcgactcaacactgcattcaaacacaagttgctcatcgctcc
gagatatggagtatggacatcgacagcagtgataggaagctattaatcttaaccggaagc
ggagacggagaagtaaaagcctggtcattggacggcgtaattctgcaaaacggcctggtc
cagaacgaaaacggcgagatatccaagcccattcagccggccggatccctgccactatca
acaaaacacagagttgcacaaatttcccggcatcctcaccttccttatcttgcaattcaa
tcacacgacagatccgtcgaagtattccgaattcgtaccgaatccgaggcgctgaaaaag
caagccaggagaaagaagcgggcaaaggaaaaggctaacaaggccaatctgaagggcaag
actacggacgtggaaatggataatgggcaagaggagactgaagcgggagttatttcgcta
gaagacctgttcactccctatttgattgttcgtgcgagcggcaaaatacgatcttttgat
ttcccagaaggaacatctggatcagagactaaaggcattcagatcatggtatcactcgct
accaatgcgctagaagtgtataatataccccctcccgttaaatcaaaggaacagcctgaa
gcagctcgtacttttacgctcgatctccctggccatcgaaccgacgtccgggcagtggcg
ctaagctctgatgatcaattaattgcttcagcatcaaacggcttgttgaaagtgtggagt
gtccagagtacagcttgtatccgcactttcgattgcggttatgcattatgttgcatattc
cttccaggagataggcaggtcgccgtgggaacaaagtcgggagagattcaagtgtttgat
cttgcttcctctgcgcttgtgcaatccatccaagcacacgaaggcgctgtgtggtccatg
cacgttcggagtgataacatcgccatggtcagtggtagtgccgacaaagacgtcaaattt
tgggaatttgagcgtaaaacagaagaaggctccaaatttgttggtcgggtggtcacaatt
gtacacgtccgaacgttgaaaatgtccgaagatgtactatcagttcgctatagccctaac
tcaaagctattagcggtcgcacttttggattccactgtcaaggtctttttccaagattcc
ctaaagtttttcctctccctttatggtcataagcttccagtgctagggatggatatttct
tcggactccaaacttatcatcacttgctcggccgacaaaaacatcaagatctggggcctt
gactttggagactgccatcgatcgttatttgctcacgatgatagcgtcatgcaagttgcc
tttcaacggaatacccactacttttggtctgtgagcaaggacaaaatgcttaaatactgg
gacggggataagtttgagcaaattcagagactcgatgggcaccacggagaagtttgggca
ctagcaacaagcaatgatggaaaattcgttgtcacgggctcccatgataaatctattcgc
atatgggaagaaacagaagagccgcttttccttgaggaggaacgcgagcgagaactcgaa
caactccacgatgatgcactcgcagatacgcttaaccgaccaagtcacgccataggagcc
ttagcgaatggcgacgaaccaaatgagactgccgaagtggagactggtgttgtagagaaa
caaactgctgatacgcttatggcaggagagcgtatcatggaagcccttgatatcgccgat
tcagagcgcgctgccgcgcttgcttatgaggagcagtgtctgggtctcacggaggaagaa
gtggcccggcatgtgctcagggttgtagaaaaggtgcctggtccagcactcttcgatgca
ctgctcgtacttccattcaccaaggtggtctcgatgctgacttacctcgatgagtgggcc
aagcgtgacatttcgacggcgatgacatcgcgcattctagtgttcctcttgcgtacccat
caccaccagatcgtagcgaataaagtgttaagaacaacgcttctagctttgagaaaccat
ctacgtggcgccctcaagattcataaagatgaggtcggttacaatcttgcggcactgaga
atcatccgacgacgagacgatctgaatcgagtgtctgaattttacgagactactataggg
gataccaagagtatggctctgtcattgcccgacgaggccactatacgcaaacaaatccag
gctgcggatgggaaaaagcgaaaacgcgtcaacatcgttgcataa

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