Rhizoctonia solani: RhiXN_04478
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Entry
RhiXN_04478 CDS
T09256
Name
(RefSeq) RNA recognition motif protein
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
rsx
Rhizoctonia solani
Pathway
rsx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
RhiXN_04478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsx03041
]
RhiXN_04478
Spliceosome [BR:
rsx03041
]
Common components
Common spliceosomal components
SR proteins
RhiXN_04478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
67026758
NCBI-ProteinID:
XP_043176714
UniProt:
A0A8H8NPL9
LinkDB
All DBs
Position
1:join(2899331..2899355,2899413..2899421,2899491..2899579,2899629..2899738,2899791..2899866,2900112..2900185,2900235..2900334,2900388..2900515,2900568..2900678,2900740..2900791)
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AA seq
257 aa
AA seq
DB search
MSKRLYLGRLPNVQKFFDGYGKIVDCRVMSGFGFVEFENSRDAEDIVTNFNGKTFLGQNI
IVEFAKENRRRDNYDDRGPPVRSRRPAGFRVIVQGLSRDTSWQDLKDFAREAGSVSFADV
DRDSPNTGIIEYVSQSDAENAVRTLDGRDLRGAPVRVTADERGGSGRERDRDRDYHRRDR
SRSPRRDRDYDRRDHRDRDHRDDRRDYRDDRRDHRDDRRDHRERRDDHRRSPRRDDRDLD
NDRYGYDHRNDRDRRDY
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgcctataccttggtcgccttcccaacgttcaaaaattctttgacggatat
ggtaaaattgttgactgtcgtgtcatgtctggcttcggctttgtggagtttgagaacagc
agagatgcggaagacattgtcaccaacttcaatggcaaaacctttttgggccaaaacatc
attgtcgaatttgccaaggaaaaccgccggcgcgacaactatgacgaccgcggacctcca
gttcgctctcgcaggccagcaggattccgagttattgtacaaggattgtcgagggatacc
agttggcaggatctcaaggactttgcccgcgaggccggctccgtttcatttgccgatgtg
gaccgcgattctcccaatacaggtatcatcgagtatgtttcacaaagtgacgctgagaat
gcggttcgcaccctagatggtcgtgacctccggggtgctccagttcgagtcacagctgat
gagcgtggtggaagcgggcgtgagcgtgatagggaccgtgattatcaccgtcgcgatcgc
tctcgttctccccgccgtgatcgcgactacgatcgccgagaccatcgtgaccgtgaccac
agggacgatagacgtgattatcgggacgaccgccgtgatcacagggatgataggcgcgac
catcgtgaaagacgcgatgaccatcgtcgctctccccgtcgtgatgacagggacctcgac
aatgaccgctacggatacgaccataggaacgaccgcgatcgtcgtgattactaa
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