Rhizoctonia solani: RhiXN_04892
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Entry
RhiXN_04892 CDS
T09256
Name
(RefSeq) transcription elongation regulator 1
KO
K12821
pre-mRNA-processing factor 40
Organism
rsx
Rhizoctonia solani
Pathway
rsx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
RhiXN_04892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsx03041
]
RhiXN_04892
Spliceosome [BR:
rsx03041
]
Complex A
U1 snRNP components
U1 related factors
RhiXN_04892
Complex B
RhiXN_04892
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
PRP38_assoc
FancD2
Motif
Other DBs
NCBI-GeneID:
67027171
NCBI-ProteinID:
XP_043177127
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All DBs
Position
2:complement(join(897591..897647,897699..898106,898167..898400,898451..898774,898825..899106,899166..899399,899459..899858,899905..899999,900051..900113,900173..900229,900281..900322,900374..900400,900455..900457))
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AA seq
741 aa
AA seq
DB search
MASIPVPVPWTEYRNPEGRIYWYNTQTKLSSWEKPEELKSPFERAMAKTPWKEHTSQGRK
YWYHSQTKESKWEMPQELVEIMEKVNKENPMPAGLPPRPGAPNFVPGPVTHADGLPAVPG
LPVNPTLALVGPGGMRPGPGLMPQPGFMPNNPAGMGSPLPTRPNMPDDPVVPPGGFPTHD
EAEKAFFHLLKKAGVDATWTWDRTMRAIITDPLYKALGSLAEKKAAWQKFVEAIKAKEKE
ERDARIAKARPGIRNLLTNSKDVHYYTTFPTAEKLFARVSAWNAAKIEEERKIIFDEFVE
ELKNAETIKQRELKTKNIARIVSLFKELDVDVLTKWRTAQQRVLECDEWQENEELRNLGP
LDMLLAFEDYSRAQERMHQEETQKKAMEKARKERKAREAFRELLDELVKGGHIRAKTKWK
NVYPMFAEDDRYLNLLGTPGSNPIELFWDVVDQFDQALEEKVSRVNRAMDAKGIKFSASV
IGENLLDTIRGSKEIEGLNEKDILDVYETFKEELNQKAAEELRKAERRKRHQIEDLRSAL
KKMDPPIGLDIPYEQAVSLMQDLKEFKAIEDEETRAAAFAKYVRKQKDKLKELSEDGGST
TSRKRKEPSHASYDRDRERDRDRDRDRKHHRDYDDHDRDRDRDRDRHRDYRDRDYRDRDR
DRDRDRDRDRDRDYRDHRDRDYRGSSRYERDDRDRGHRSDRHRRDTMDVDRYELDYADER
ARKKTRMEVDGREDSPEEGEI
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcatctatacctgtaccggtaccatggactgagtaccgcaatcctgaagggaggata
tactggtacaacactcaaactaaattgagctcatgggagaagccagaagagctcaaatct
ccattcgagagagcgatggccaaaacaccctggaaagagcacacatctcaaggacgtaaa
tactggtatcatagtcaaaccaaagagtccaaatgggaaatgccacaggaactcgtcgaa
attatggaaaaggtcaacaaggagaaccccatgcccgccggtctcccaccccggcccggt
gctccaaactttgtaccaggacccgtcactcacgcggacggtctcccagcggtcccaggt
ctaccggtgaacccgaccctcgctctcgttgggccaggcggaatgcgtccaggcccagga
ctcatgcctcagccaggtttcatgcccaacaatcccgctggtatgggctcacctctcccc
actcgccccaatatgccggacgatcctgtcgttcctccgggtggtttccccacgcacgac
gaggcagaaaaggcgtttttccatctcttgaaaaaagccggtgtggatgcgacttggacc
tgggacaggactatgcgtgcgatcatcaccgacccactctacaaggctctaggaagtttg
gctgagaagaaagctgcgtggcaaaagttcgtggaagctatcaaggccaaggaaaaggag
gaacgtgatgctcgaatcgcaaaagctcgtccaggtatacgtaacctgttgaccaactct
aaagatgtacactattacactactttccctacggccgaaaagctgttcgcaagggtttct
gcgtggaacgctgccaaaatcgaagaagagcgtaaaatcattttcgacgaatttgtcgaa
gagctgaagaatgcggaaacgattaaacagcgcgagctgaaaaccaaaaatattgcccga
atcgtttccttgttcaaagagcttgacgtggatgtccttaccaaatggcgcaccgctcag
caacgagttcttgaatgtgacgaatggcaagaaaacgaagaactaaggaatcttggtcca
ttagacatgttgcttgcctttgaagactattctcgtgcacaggagcgcatgcaccaagaa
gaaacccagaagaaggcaatggagaaggctcggaaagaacggaaagctcgtgaggcattc
agagaacttctcgatgaacttgtcaaagggggccatattcgtgccaaaactaagtggaag
aatgtgtaccccatgttcgccgaagacgatcgttacctgaatcttctcgggacacccggg
tcgaatccgatcgagttgttttgggacgtggtcgaccaattcgatcaggcacttgaggaa
aaggtttcgcgcgtcaaccgggcgatggatgccaagggcatcaaattcagtgcctcggtg
attggggagaatctccttgataccattcgaggatcaaaggaaattgagggtctcaatgag
aaggatattctggatgtttacgagactttcaaagaagagctgaatcaaaaagccgccgaa
gagctgaggaaagctgagcgccgaaagagacaccagatcgaagacctgcgtagtgcgctg
aaaaagatggaccctcctattgggttggacatcccatacgagcaggctgtttctctcatg
caagatctgaaagaattcaaggcgatcgaggacgaagaaacccgcgcggccgcgtttgcg
aaatacgtccgcaaacaaaaggacaaactcaaggagttgtccgaggatggtggctctacc
accagtcggaaacgaaaggaaccctctcatgcctcgtatgatcgtgaccgagagagggac
cgggaccgtgatcgggatcgaaagcaccatcgagactacgatgaccatgaccgagaccga
gaccgagaccgcgatcgccaccgagactaccgtgatcgcgactatcgagaccgagaccgc
gaccgggacagggatcgtgatcgtgatcgtgatcgtgactatagggatcacagggatagg
gactaccggggctcatcgaggtacgagcgagatgaccgcgacagaggacaccgttccgat
cgacatcgacgagatactatggatgtggaccggtacgagttggactatgcagatgaacga
gccagaaagaaaactcgtatggaagtcgatggacgggaagacagtcccgaagaaggcgaa
atttaa
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