Entry |
|
Name |
(RefSeq) AAA family ATPase
|
KO |
K13525 | transitional endoplasmic reticulum ATPase |
|
Organism |
|
Pathway |
rsx04141 | Protein processing in endoplasmic reticulum |
|
Brite |
KEGG Orthology (KO) [BR:rsx00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
RhiXN_04926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:rsx03019]
RhiXN_04926
03009 Ribosome biogenesis [BR:rsx03009]
RhiXN_04926
04131 Membrane trafficking [BR:rsx04131]
RhiXN_04926
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:rsx04147]
RhiXN_04926
Messenger RNA biogenesis [BR:rsx03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
RhiXN_04926
Ribosome biogenesis [BR:rsx03009]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
RhiXN_04926
Membrane trafficking [BR:rsx04131]
SNARE
SNARE associated proteins
Others
RhiXN_04926
Autophagy
Aggrephagy
Other aggrephagy associated proteins
RhiXN_04926
Exosome [BR:rsx04147]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RhiXN_04926
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2:complement(join(1028321..1028458,1028512..1028890,1028950..1029170,1029228..1029248,1029290..1029661,1029715..1029950,1029997..1030410,1030463..1030756,1030814..1030893,1030953..1031066,1031117..1031196))
|
AA seq |
782 aa
MSLDPSGAPPQPGENDVATAILRPKKSPNRLIVDEATSDDNSIATLNPQTMEALQLFRGD
TIIVRGKKRKDTVLICLSSDDVDEGKIQMNKVARHNLRVKLGDLCTVQPCHDIKYGKRVH
ILPFDDSVEGLAGNLFEVYLKPYFLEAYRPVRKGDTFLVRGGMRTVEFKVIETDPAEFCI
VAQDTVIHVEGEPVKREDEESNLADVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGI
KPPRGILMFGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEK
NSPAIIFIDEIDSIAPKREKARPFARPLERRVVSQLLTLMDGMKARSNIVVMAATNRPNS
IDPALRRFGRFDREVDIGIPDPTGRLEILRIHTKNMKLADDVDLERIAADTHGYVGSDIA
SLCSEAAMQQIREKMDLIDLDADTIDAEVLDALGVTMDNFRFALGVSNPSALRETVVEVP
TVKWSDIGGLEKVKQELQETVQYPVEHPEKFLKYGMSPSKVYSSTVPRVLANFISIKGPE
LLTMWFGESEANVRDVFDKARAAAPCVMFFDELDSIAKARGSSGGDAGGAGDRVLNQILT
EMDGMNAKKNVSSGPAYLHSLPDEPSRISILKAALRKSPVSPKVDLNFLAKSTHGFSGAD
LTEICQRAAKLAIRESIDADIRRIRERREKEDGGDAEMEDEEDPVPEITIEHFEEAMKFA
RRSVSDQDIRRYEMFAQNLQQSRSFGSSFKFPEGGPGAAGTQPASGGAAFATDDAGDDDL
YA |
NT seq |
2349 nt +upstreamnt +downstreamnt
atgtctcttgatccttcaggcgcaccaccccaaccaggtgagaacgatgtcgctaccgcc
atccttcgccccaagaaatccccaaaccgcctcattgttgacgaagcaacctccgacgac
aactcgatcgcaacccttaacccccagacaatggaggcactccaattattccgaggtgac
acaattattgttcgtggcaagaaacgcaaggacactgtcttgatttgcttgagctccgac
gacgtagacgaaggaaaaattcaaatgaataaagtggctcgccacaatctgcgcgtcaaa
cttggcgatttgtgcactgttcagccatgtcatgatatcaaatatggtaaacgcgtgcat
atactgccgtttgatgattccgtcgaagggcttgctggaaaccttttcgaagtctatctc
aagccttatttcctggaagcatatcgaccagttcgaaaaggagacacttttctcgtccgc
ggagggatgcgtactgtggaattcaaggtcattgaaactgatcctgccgagttttgtatt
gttgcgcaagacaccgtcattcacgttgagggcgagcctgtcaaacgcgaggacgaagag
agcaatcttgccgacgtagggtacgatgatattggtggctgccggaaacaaatggcccaa
attcgcgaacttgtggagctgccgcttaggcacccgcaactcttcaagtcgatcggtatc
aaacccccacgcggtattctcatgtttggaccacccggaaccggtaagacccttatggca
agggcggtggccaacgagaccggtgccttctttttcctgataaacggcccggaaatcatg
agcaagatggctggtgaatccgaaagtaatttacgcaaagccttcgaagaggccgaaaag
aactctcccgcgattattttcatcgacgagattgatagcattgctcctaaacgtgaaaag
gcacgaccgttcgcacgacctctggagcgtcgagttgtctctcaattgttgacactgatg
gatggaatgaaagcccgatcaaacattgtggtgatggcggccactaaccgtccgaattct
attgatccggcccttcgtcgctttggccgattcgatcgtgaggttgacattggcattcct
gatcctactggccgcttggagatcctgcgcattcacaccaagaatatgaagcttgcagat
gatgttgacttagagcgaatcgctgctgacacacacggttatgtcggatccgatattgct
tcattgtgttcggaagccgcaatgcaacaaatccgcgagaaaatggatcttattgacctt
gatgcagatactattgacgctgaagtgcttgatgcccttggtgtgacaatggataacttt
agatttgcgctgggcgtctccaacccatctgcgttgcgagagacggttgtggaggtcccc
actgtcaaatggtcggatatcggtggtctcgaaaaggtcaagcaggagctacaggagacc
gtacaataccctgtggaacatccagagaaattccttaaatatgggatgtctccctctaag
gtgtactcttctacggtcccccgggtactggccaatttcattagtatcaagggaccggag
ttgctcaccatgtggtttggagaatcggaagccaatgttcgtgatgtatttgacaaagcc
cgagctgccgcaccgtgtgttatgttctttgatgagctggactcgattgcaaaggcgcgt
gggagcagcggaggcgacgcgggaggtgctggcgaccgtgtactgaatcagatcctgacc
gaaatggacggaatgaatgccaagaagaacgtgtcgtctggaccagcttatttacattcc
cttcctgatgaaccttctcgcatatcgatcctcaaggcagcgcttcgtaaatcacctgtt
tctccgaaagttgatctcaatttcttggccaagagcactcatggattctctggagcggat
ttgacggagatttgtcaacgtgcagcaaaactggccatccgagaaagtatcgatgccgat
atccgtcgtattcgcgagcgtcgcgagaaagaggacggaggagacgctgaaatggaagac
gaggaggatcccgtaccggaaatcacaattgagcattttgaagaagctatgaaattcgct
cgtcgctcagtctcagaccaggacatccgtcggtatgagatgtttgcacagaacttgcag
cagtctcgttcatttggatcctccttcaagttcccagagggtggtcccggtgctgctggt
actcagcctgcatctggcggcgccgcatttgccacagacgatgctggagatgacgatctc
tacgcataa |