Rhizoctonia solani: RhiXN_05289
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Entry
RhiXN_05289 CDS
T09256
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
rsx
Rhizoctonia solani
Pathway
rsx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
RhiXN_05289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsx03019
]
RhiXN_05289
03036 Chromosome and associated proteins [BR:
rsx03036
]
RhiXN_05289
Messenger RNA biogenesis [BR:
rsx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
RhiXN_05289
Chromosome and associated proteins [BR:
rsx03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
RhiXN_05289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
DUF4845
Motif
Other DBs
NCBI-GeneID:
67027568
NCBI-ProteinID:
XP_043177524
UniProt:
A0A8H8NR68
LinkDB
All DBs
Position
2:complement(join(2115761..2115996,2116048..2116244,2116274..2116287,2116341..2116475,2116526..2116711,2116806..2116971,2117035..2117138,2117188..2117937,2117985..2118072,2118120..2118199,2118251..2118343,2118394..2118522))
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AA seq
725 aa
AA seq
DB search
MSALALQPHLISVGGLDDFQSSQHTFAASISPRGNSIVAHASSKAPQAPTKKRLPADSLL
YFASWDHIPESTVEFYCDTYLTFTTIQNIAKSLKNDSATQLLSEEQITNYYSRSIEQYIN
DAKKQITSLASQDPLPPTYPTYVSILETLQLVQTVYAPHGGQINGLIGEQLLQWLNTSHT
VPATAELIRLSALPEPWSDPDFWPTLNKCVLRGLSTSALGFLRRVASNHPSTVLRTFIRD
SLVPVLETHPRSSEFQRESGFLAAHSRWRERVAEVRMALDRAVDTDSGEADEDEWSRWVD
ELLGVIEGDDGVVFALCNEAVEDGWGFREVIGVWGVWVDVGLKRTQLAKVVERVAEEMPP
DPTVPVQELHRAILAMEELEALEIAAQVDPWLAAHLADIFEKVETLDPQDEIAQTYGMSI
RDHFVLSYAEHLHSDPTLFEIELEYMGRCGAIGRERIAAVICHIPVIPPPTDPKVSEKSL
SRLKSLGVDDQGLPLAPRIVDAGMWEGCDRVDKLLSVCDQFALRDESREICKIVAQHLTR
TKSYGLAISYSAFAQDVRGVGRIATLLLEEYVQNGEFARQHLYMRVNATDPISARLQFVA
RFADFHTFSEDGAKGEAVRLLVRMLDRSIVPRAWQAVVLLDAASLLEGSDEELLITTDDA
YELLRYLQNIYTQAALGAGSDYLEVLARITMRGKGNTAETEALQSLDIVRLVLARYLARC
TVQRF
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcttgcacttcagccgcacttaatctcagttggagggcttgacgattttcag
agctctcaacatacatttgccgcctcgatttctcctcgaggtaatagtatagtagctcac
gcgtcgtcgaaagcgcctcaagctccaacaaagaagagactaccggctgacagtttatta
tactttgcatcttgggatcacatccccgagtccacagtcgagttttactgtgatacgtat
ctgaccttcacaacgattcaaaatatcgcaaaatctctaaaaaacgactctgctacacag
ttactatcagaggagcaaatcaccaactactatagtcgttctattgaacaatacatcaac
gatgccaaaaaacagataacttcacttgcttcacaagatccactcccgccaacctatcct
acatatgttagcatactcgaaaccttgcagcttgttcaaacagtttatgccccacacggg
ggccagatcaatggcctgataggagaacagctacttcaatggctcaatacatctcatact
gtccccgctaccgccgagctaattcggctttcggcactacctgaaccttggtcagatcct
gatttctggcccacactaaataaatgtgttcttcgtggactttccacatctgctcttgga
tttctccgccgagtcgcttcgaatcatccaagtaccgtattgcgaacttttatacgggac
tcgctcgttcctgttcttgaaacacatcctcgtagcagcgaatttcaacgcgagtctgga
ttcttggctgcccattcgcgatggcgtgagcgtgtagccgaggttcgcatggctcttgat
agggctgttgataccgattccggagaggccgacgaggacgagtggtcacgatgggttgat
gagttactgggagttatcgaaggtgatgatggtgttgtattcgccttatgtaacgaggct
gtggaagatggttgggggttccgtgaagtgattggcgtctggggtgtttgggttgatgtc
gggctgaagcgaacgcaattggctaaggttgtggagagggttgcggaggagatgcctccg
gacccaaccgtgcctgtacaggagctgcaccgagctatacttgctatggaggaattggag
gcattggaaatcgctgcacaagtcgacccatggttggctgcacatctcgcggatattttt
gaaaaggtagaaacattggacccacaagacgagattgcccagacctatggaatgagcatt
cgagatcatttcgtgctatcctacgccgaacatcttcattctgatccaactctgttcgag
atcgaactagaatatatgggacggtgcggtgctattggccgagagcggattgcggccgtg
atttgccatattccggttataccacctcccacagatcccaaggtttcagaaaagtcctta
tctcggctcaaatccctgggagtagacgatcaagggctgccccttgctccacgcatagtg
gacgcggggatgtgggagggatgcgatcgcgttgataaattgctcagtgtatgtgatcaa
ttcgcattacgcgacgagtcgcgtgagatctgcaagattgtggctcaacacttgactcgg
acaaaaagctatgggctagcgatatcctattctgcgtttgcccaggatgtacgaggggtg
gggcgtattgcgacacttcttctcgaggaatatgttcaaaatggcgagtttgctcggcag
catttgtacatgagagttaatgccacggacccaatttctgctcggcttcaatttgttgct
cgattcgccgactttcacacattttcggaggacggtgcaaagggagaagctgtacgccta
ttggtgcgcatgttggataggtcgatcgttccaagagcctggcaagctgtggtattactt
gacgctgcgagtttgctcgaaggttcggatgaggagctgcttatcacgaccgatgatgca
tacgaattgctccgatacctccaaaacatctacacccaggcggcactcggagctggctca
gactatctagaagttcttgcacgaataacaatgcgaggcaagggaaacacagccgaaacg
gaagcacttcagtctctagatatcgttcgattggttcttgctcgctatctcgcgcgctgc
acggttcagcggttctga
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