Rhizoctonia solani: RhiXN_06185
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Entry
RhiXN_06185 CDS
T09256
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rsx
Rhizoctonia solani
Pathway
rsx00040
Pentose and glucuronate interconversions
rsx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RhiXN_06185
Enzymes [BR:
rsx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
RhiXN_06185
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
67028464
NCBI-ProteinID:
XP_043181433
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All DBs
Position
7:join(42011..42138,42197..42366,42418..42479,42537..42865,42926..43089,43141..43238)
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AA seq
316 aa
AA seq
DB search
MKFTASALALITGLGVVSANPLLQKRASASDSAPLGYATLSGGTTGGGSATPVTVTTLDE
LKAAVTGNSAKVIIISGSITGNEVVKVGSNTSVLGKSGAALNGVGLRVLDVSNVIIRNLK
ISKVLADAGDAIGVQAANRVWIDSLELWSDKDHNKDYYDGLLDITHGCYAVTVTNSYLHD
HWKASLVGHSDNNKSEDLGIQVTYAYNKWQNLNSRTPSFRFGHGHIFNNYFLNNQDGINT
RVGAELLVQNNIWEGCKNSVYSTDNGYANLSGNDYGGKAATALTTTWSSVGYGYNLKDAS
EVKGYVESVAGAKLSF
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcacggcatctgcgctcgctcttattactggcctcggagttgtttctgccaac
ccccttctccaaaaacgggcctcagcgagcgatagcgcacctctaggctatgctacactc
agcggaggtaccactggtggtggatcagcgactcccgtcactgtgaccaccctcgacgag
ctgaaggcagcggtgactggcaacagtgccaaggttattattatctctggctccatcacc
ggtaacgaggtggtcaaagttggatccaacacgtctgttctaggaaaatcaggtgctgct
ttgaatggtgtcggtttgcgcgtccttgacgtttcaaatgtcatcatccgtaatctcaag
atcagcaaggtacttgccgacgctggagatgcgattggcgtgcaagctgccaaccgtgtg
tggatcgactcccttgagctctggtccgacaaggaccacaacaaagactattatgacggc
cttcttgatattactcatggttgctacgccgttaccgtgaccaacagctacctgcatgat
cactggaaggcctctctcgtgggacactctgataataacaagagcgaagacctcgggatt
caagttacctatgcatacaacaagtggcagaacttgaactcacgcactccctctttccgc
ttcggccacggtcacatcttcaataactatttcctgaacaaccaagacggtatcaacacc
cgcgtcggtgcagagctgctcgttcaaaacaacatctgggaaggttgcaagaactctgtt
tacagtaccgataatggctatgctaacctcagtgggaatgactatggcggaaaagccgcc
actgccttaaccactacttggagctcagttggctatggctacaatctaaaggatgcaagc
gaggttaagggctatgtagaatccgtggctggtgccaagctctcgttctaa
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