Rhizoctonia solani: RhiXN_06365
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Entry
RhiXN_06365 CDS
T09256
Name
(RefSeq) UV excision repair protein rhp23
KO
K10839
UV excision repair protein RAD23
Organism
rsx
Rhizoctonia solani
Pathway
rsx03420
Nucleotide excision repair
rsx04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
RhiXN_06365
09124 Replication and repair
03420 Nucleotide excision repair
RhiXN_06365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rsx03051
]
RhiXN_06365
03400 DNA repair and recombination proteins [BR:
rsx03400
]
RhiXN_06365
Proteasome [BR:
rsx03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
RhiXN_06365
DNA repair and recombination proteins [BR:
rsx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
RhiXN_06365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
ubiquitin
XPC-binding
UBA_7
Rad60-SLD
Ubiquitin_5
CUE
Dsc3_N
Rad60-SLD_2
UBQLN1
UBA_RAD5A
Crinkler
UBA_3
UBA_9
Ubiquitin_2
UN_NPL4
Motif
Other DBs
NCBI-GeneID:
67028644
NCBI-ProteinID:
XP_043181613
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All DBs
Position
7:complement(join(616447..616554,616605..616970,617030..617215,617265..617636,617691..617770,617826..617937,617999..618025))
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AA seq
416 aa
AA seq
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MKITFKTLQQKQFQIDAEPSDTVLQLKEKIKDAQGHQVEQQKLIYSGKILSDDKSVESLG
IKEKDFLVVMVSKPKATPAASTSAAPAAAPVAAPVPSTPAASTPAPAPVPAPAAPSGDVT
MTPATESPAPATSTPAPAPAAQEPQGAFGDTSSFVAGGALNSAIENMMGMGFEREQIMRA
LRASFNNPDRAVEYLLTGIPEHLLAETAPPASGGPAATPAASNPAPAAPTTPAAAPAARP
TTTSGTGGGASGPLNLFAQAAAQSGGNPSTGAGADAGEGAGGGAGINPAALESLQNSPMF
QNTLGAIRENPALLQPLIQQLAQSNPAIAQQLTSNPELLYQILGGLGGDDQDDDGDGEGG
GIPPGAHVINITQEEAEAIARLEALGFPRQLAIEAYFTCDKNEELAANYLFENGFN
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacgttcaagactctgcaacaaaagcagtttcaaatcgatgcggagccctcc
gatacggtcctgcaattgaaagagaaaatcaaagatgctcaaggccaccaagtcgaacaa
cagaagctgatctattccggtaagatcttgagcgacgataaatcagtcgaatcgctgggc
attaaggagaaagatttcttggtggtcatggtttcgaaacccaaagccactccggcagct
tcgaccagcgccgccccggctgcggccccagtggctgcccctgtgccctcgaccccggca
gcttcaacccccgcaccagctcctgttccagcacccgccgcaccatctggagatgttact
atgactccggctactgaatcacctgcccccgctacatcaactcctgcccctgctcctgct
gcacaagagccacagggagcctttggggatactagctcgttcgttgcaggtggtgctctc
aattctgctatcgaaaacatgatgggcatgggctttgaacgagaacaaattatgcgtgca
ttgagagcaagcttcaacaaccctgaccgggcagttgaatatcttctcaccggcattccc
gaacatttattggctgaaaccgcaccacctgcatccggcggcccagcagccacaccagct
gcatccaacccggctcctgctgctcctaccaccccagccgccgcacctgccgcgcgtcct
actacaacttctgggacaggaggtggagcatccggcccactgaacctgttcgctcaggcg
gctgcccaatctggtggtaacccatctactggggctggtgcagatgctggggagggcgcg
ggcggtggcgcaggtatcaaccctgcagcactggagagtctgcaaaatagcccgatgttc
cagaacactttgggtgccattcgtgaaaacccagctctcctccagcctttgatccagcaa
cttgcccaatctaaccctgcgattgcccaacagcttacgtcaaaccccgaactcctctac
caaatcttaggaggacttggtggagacgaccaggacgacgatggcgatggtgaaggcgga
ggaattcccccgggtgcccatgttatcaatattacgcaggaagaggccgaggcaatcgca
aggctcgaggctctcggtttccctcgccagttagcgatagaggcttatttcacttgcgac
aagaacgaggagttggcagcaaattacttgtttgagaatggctttaattaa
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