KEGG   Rhizoctonia solani: RhiXN_06372
Entry
RhiXN_06372       CDS       T09256                                 
Name
(RefSeq) DNA polymerase epsilon subunit 1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
rsx  Rhizoctonia solani
Pathway
rsx03030  DNA replication
rsx03410  Base excision repair
rsx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RhiXN_06372
   03410 Base excision repair
    RhiXN_06372
   03420 Nucleotide excision repair
    RhiXN_06372
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsx03032]
    RhiXN_06372
   03400 DNA repair and recombination proteins [BR:rsx03400]
    RhiXN_06372
Enzymes [BR:rsx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RhiXN_06372
DNA replication proteins [BR:rsx03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    RhiXN_06372
DNA repair and recombination proteins [BR:rsx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      RhiXN_06372
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 67028651
NCBI-ProteinID: XP_043181620
UniProt: A0A8H8NZZ2
LinkDB
Position
7:complement(join(637009..637041,637092..639509,639565..642021,642069..642254,642312..642492,642550..642866,642924..643589,643639..643734,643791..643916,643971..644261))
AA seq 2256 aa
MARGQATFGIPGSGRGRGRNTNFRGGRGRGGFNRGRGRGGNPANGDTGPGPQRANEETRL
EDRFEEARIRDEVDEKLGFGKYLEGPKRIGWLVNMHPTLVRDEEHKTGRAGVDYYFIQDD
GDMFKATLIHDPYFYVGCKSGTESAVEEWLMKKYEGVILRINRVKKEDLKMPNHLLGHLR
LYLQLQFANVSDLLAVRREIMPLALTNAAKLSAVDAYAEVVQAAASNSASMDIDYDNDDP
DGMSSSRPRQAWGAEEDPAAAARARTADPSALITDIREYDVPYYLRVAIDCDIRVGLWYE
VAMDAGQLTLTRLVDRVKRAEPVVMAFDIETTKAPLKFPDQATDCIMMISYMVDGQGFLI
TNREIVGEDIDDFEYTPKPEYEGPFTIFNEKDEVALLQRWFEHIRECKPTVMATFNGDSF
DFPFVEARAKVHGLDLMLETGFARDSEDEFKSRACIHMDCFRWVKRDSYLPQGSQGLKAV
TKAKLGYEPIELDPELMTPYASEQPQVLSQYSVSDAVATYYLYMKYVHPFIFSLCNIIPL
NGDEVLRKGSGTLCETLLMVEAYKAGVIMPNRHEEPTGNTYEGHLLASETYVGGHVEALE
AGVFRSDIATHFKIVPEAIQGLINDLDAALIFCIVEESKVPLESVTNYDEVKSKIQAALE
DLRDKPLRQDNPLIYHLDVAAMYPNIMLSNRLQPDSVVDEAMCAVCDFNRPDKTCDRRMT
WAWRGEFFPAQRDEYNMIKHALNQEMFPPRKPGLPERRFNELTENERTALLHKRLGDYSR
KVYRKTKETKVVYRESIICQRENPFYVDTVRSFRDRRYEYKGLHKTWKRNLDLASEGGSL
ADVAEAKKMIVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGITCLTGARIIQMARQ
LVEQIGRPLELDTDGIWCMLPGTFPENFKFQTTKGKAIGFSYPCTMLNHLVHAQFTNHQY
HDRVEKNSTKYKVHSENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNEDGSLAELKG
FEVKRRGELQLIKIFQSSIFEKFLLGTTTEECYAAVAEVADQWLDVLFSRATALADEELV
ELIAENRSMSKTLAEYGAQKSTSISTAKRLSEFLGSQMVKDKGLACKFIISAKPLGAPVT
DRAVPVAIFSAEESVKRTFLRKWLRDNSLVDFDIRSILDWGYYIERLGSVIQKLITIPAA
MQKVANPVPRIRHPDWLHKRVAALEDKFQQHKMTDFFKTAPRAPVDTQDGNADVDMEDFG
KQKSADNRVKAVVKKPVKPAVAAPPKAPLPDPSKNYSAWIRAMRPRWEERRRERLGVDMD
ASVASIFKGARMTSTYVWEIVQIRPRRDPGKFTLWLSLEDKLVSVPLRIPREFYLNLKSP
DISLFDDSYRTENVVRTLPRNHPCHHLFRVSVSEDEYLRMESHFAHLTNNPNVDGVYEMQ
IPHTMRAVLKLGTICTTTKENDISINRAQSLGLELNGLERAGPSLTQRTYLDGGNVLKPL
FIYYATNHGRHVLVLVLPKGKFQVHMVSPGGNREPLRKMQEQYSALNSARKAAGGASLYE
YPEAIETEFVFHKDEQKLMASLSAELGSVSDKHYSIVLSSSRDPEYFDLRVKNMHKFPVI
PMLTDRAAHLVTAPLQWQNETVEKLMTQYLSFGSWLQTAIEQSTYFDVPLGNIGADSPLF
FADVDFARRLWQNDSLLWWSPGLRPDLGGTEHDMNAPSDDPNSSVDLANPGCYTNVCLAV
NVRNLALNSVLQSGIVNELEGTAGATAFDSASHTLNDYASGEARVSVTLGDSVISPQTFG
ILKGMAKTWLLDKVRNPGGPSQHAVDHFWRWLSSPSAQMYDPSMQRFVQGLMKKTFIQML
AEFKRLGSQVVKADFGHIILVTSKPPGTAGAYAAYLLNAVNSHDLFTHLELQPDRYYDFL
LFMDSANLGGVVSEDAYSSSESSGPCVAMNWSIESFFPPAVRAAFHQDLRRIIVELYTEH
QNHADVDRAPLRVIDNLTQDASAAPQDEVQQKTNEAVTNYLESRLTRRLLGRVAKILSSQ
KQAFIEEETREEWLWPLLPGSHRTMATPVIEYVKAMCACLTLIRTHSNEVGILRRNLLEL
VGVREFANEAHWSDPSARCRVPHVVCRTCTHVRDLDLCRDADLMERTPSRSRAGAMETKW
ECSACGSAYDRRAIESTLIDNVRSLIAAHQAQDLKCTRCKQIRIDDMSPHCKCAGPWQLT
VGRAEALRRIRVLANVATFHGLPFLKEYAEATMARW
NT seq 6771 nt   +upstreamnt  +downstreamnt
atggctcgaggtcaggcaacttttggtataccaggctccggaaggggccggggtcgcaat
acaaattttagaggcgggagaggaagaggtggtttcaaccgaggaagaggccgaggaggc
aatcccgccaatggtgatactggacctggtccacagcgcgcaaatgaagaaactagactc
gaagatcgatttgaagaggccaggatacgcgatgaagtggatgaaaagcttggctttggg
aagtatctagaaggtcccaagcgtattggctggctggtcaatatgcaccctacccttgtt
cgagacgaagaacacaaaacgggccgtgccggtgttgactattactttatccaagatgac
ggtgacatgttcaaagctacacttattcatgatccatacttctatgtcggctgcaagtcg
ggtactgaaagcgcagttgaagaatggctgatgaaaaagtacgagggagttattctgcgt
atcaatcgcgtcaagaaagaggacctaaagatgccgaatcatcttctcggtcatctacgg
ctttacttacaactccaattcgccaatgtctccgatctgttggctgttcgccgagaaatc
atgcctctggcactcaccaatgctgcgaaactcagcgcagtcgacgcatacgccgaggtc
gtgcaagccgcggcttcgaattccgcaagcatggatattgactacgacaatgacgaccca
gatggcatgtcatcatcccgtcctcgtcaagcctggggtgccgaggaggaccctgcggct
gctgctcgtgctcgcacggcggacccaagtgctcttatcaccgatatccgagaatatgac
gttccatactacctccgcgttgccatcgattgcgacatccgagttggattgtggtatgaa
gtagctatggatgctggtcagcttaccctcactcgtctggttgatcgagtcaagcgtgct
gagcctgtggttatggcttttgatatcgaaacaaccaaggcccccctcaagttccccgat
caagctaccgactgcatcatgatgatctcctacatggttgatggacaaggttttctaatc
acaaaccgagaaattgttggcgaagatatcgatgactttgagtacacgccaaagcctgaa
tacgaaggcccattcactatcttcaacgaaaaggacgaggttgctcttctacagcgctgg
tttgagcatatccgtgaatgcaaacccacggtcatggcgacgttcaacggtgactccttc
gattttccgtttgtggaagcacgcgcaaaagtccatgggcttgaccttatgcttgagact
ggattcgctagagactcggaggatgaattcaagtcacgggcttgcatccacatggattgt
ttccgttgggtaaagcgtgactcttatcttccccaagggagtcaaggcttgaaagctgtc
accaaggcgaagttaggttatgagcctatagaattggaccccgaacttatgacaccgtat
gcgtcagagcaacctcaagtgctgtcccaatattccgtttccgatgctgtggctacctac
tacctctacatgaaatacgttcacccctttatattttctctttgtaatattattcccctc
aatggcgatgaggtattacgaaagggtagcgggactctctgtgaaacgttgcttatggtt
gaagcatataaagctggcgtcattatgcccaacaggcacgaagaaccgacaggaaatact
tatgaagggcatttgctcgcttctgaaacttatgttggtggccatgtcgaggcattggag
gctggagttttccgtagcgatatagccacgcacttcaagatcgttccagaggctattcaa
gggctcatcaacgacttagatgcggctttgatattctgcattgttgaggaatccaaggta
cccctggagagcgttaccaactacgatgaagtcaaatcaaagattcaagccgctttggaa
gaccttcgagacaaaccattgcggcaagacaaccctcttatctaccacttggatgtcgcg
gccatgtatcccaacatcatgttgtcgaaccggctccagcctgattccgtggtcgacgaa
gcgatgtgtgctgtctgcgactttaacaggcccgacaaaacctgcgatcgacgcatgact
tgggcgtggcgtggcgagttcttcccggcccaacgcgacgagtataacatgatcaaacac
gccctcaaccaggagatgtttcctcccaggaaacccggtttgcccgaacgtcgtttcaac
gagctcaccgaaaacgagcgcacggcactcttacacaagcggctcggtgattactcgcgc
aaggtgtatcgcaagaccaaggaaaccaaggttgtgtaccgcgaatccatcatttgccaa
cgtgaaaaccctttctatgtggataccgtgcgtagcttccgtgaccgtcgatacgaatac
aagggattacacaagacgtggaaacgcaatttagaccttgcatccgagggaggctctctc
gcagatgtcgctgaagctaaaaagatgatcgtactctacgactcgttacagcttgctcat
aagtgtattttgaactcgttctacggctacgtaatgcgaaaaggtgctcgatggcactcg
atggagatggctgggatcacctgtcttactggcgctcgtatcatccaaatggctcgacaa
ctggtagaacaaattggtcgccctctagaactggacacggacggtatttggtgcatgctt
ccaggcacattcccagagaactttaagttccagacgaccaagggcaaagcgatcggtttt
tcgtacccctgcaccatgcttaatcatcttgttcatgctcaatttacgaaccatcaatac
catgaccgagttgagaagaactctactaaatacaaggtccacagcgagaactcgatcttt
ttcgaattggacggaccatacaaggcgatgattctcccctcgtccaaggaagaagataaa
ttgctcaagaagcggtatgccgtatttaacgaagacggctctttggccgagttgaaaggc
ttcgaagtcaaacgccgtggagagttgcaactcatcaagatcttccaatcatcaatcttt
gagaaattcctgttgggtaccacaaccgaagaatgttatgccgctgttgcagaagttgcc
gaccagtggctcgatgtactcttcagtcgggctacagctcttgctgatgaggagttagtc
gaacttattgccgaaaaccgaagcatgtccaaaacactcgccgaatatggtgctcaaaag
tcgacgtcgattagcactgctaagcgtctttccgaattcttgggtagccagatggtcaaa
gacaaaggcctggcctgcaagttcatcatttcagccaaacctttgggagctcccgtcact
gatcgcgcggttcccgtcgccatattttctgcggaggagtcggtaaagcgcacgtttttg
cgtaaatggctccgagataatagtctcgttgactttgatattcgttcaatcttggactgg
ggctattacattgagcgactcggatcggtcattcaaaagcttatcactattcccgctgct
atgcaaaaggtcgccaacccggtcccacgaatccgtcatccagattggcttcataagcgc
gtcgcagcactcgaagacaagttccagcagcacaagatgaccgattttttcaaaacagca
cccagggctcccgttgatactcaagacggaaatgctgatgtggatatggaagactttggc
aaacaaaagtccgcagacaaccgtgttaaggcagtggtcaagaagcctgtcaaacctgcg
gtagctgcaccaccaaaggcacccctccccgatccttctaagaactattcggcgtggatc
cgagctatgcgacctcgatgggaggaaaggcgccgagagcgactgggtgtggacatggac
gcttccgttgcctctatcttcaaaggagctaggatgacatctacctacgtctgggagatt
gttcaaattcgcccaagaagagatcccggaaagttcacactttggctgtctctggaggac
aaattggtttccgttcctctacgcatccctcgcgagttttacctcaacttgaagagccca
gatatcagcttgttcgacgacagttatcgtacggaaaacgttgtacgaacgctcccacgc
aatcatccatgtcaccatctattccgtgtcagtgtttcagaagacgaatacctaagaatg
gagtcacatttcgcgcatttaaccaacaatcctaatgtggatggtgtctacgagatgcag
attccccataccatgcgtgcggtcttgaaactcgggacgatatgtactacaacaaaggaa
aacgacatatccataaaccgagcccaaagtctaggactcgagctgaacggcctagaacga
gctggcccatctcttacgcagcgcacttatcttgatggcggcaatgttttgaaaccccta
ttcatctactatgccaccaaccatggccgtcatgtccttgtccttgtcctcccgaaaggc
aagttccaagtacatatggtcagtccaggaggcaatcgtgaaccgctacgcaaaatgcaa
gaacaatattcggccctcaactctgcgcgcaaggccgcagggggggcctcgttatatgaa
tatccagaggcaattgaaaccgaattcgttttccacaaagacgaacaaaagctcatggct
tccttatcagcggaacttggctctgtgagcgataaacattactccatcgtactatcatct
tcaagagatccagaatatttcgaccttcgagtcaagaatatgcacaaattcccggtgatc
ccaatgctcaccgaccgagcagcacacttagtcactgcgccactccaatggcaaaacgaa
accgtcgaaaaactcatgacacaatacctctcctttggctcttggttgcaaaccgctata
gagcagtcaacgtacttcgatgtcccacttgggaacattggagcagactccccccttttt
tttgcagatgttgattttgcacgtagactatggcaaaacgattcactcttgtggtggtct
cccggcctccgccctgaccttggaggaacggagcatgacatgaacgcccctagtgacgac
cccaattcgagtgtggatcttgccaaccctggatgctatactaatgtttgcctggctgtc
aacgtccgtaacctggccctgaactcggtcttgcaatccggtattgtaaacgaactcgaa
gggacagctggtgctaccgcctttgactctgcctcgcatacactcaatgattacgcatct
ggcgaagcgcgagtatcagtgacactcggcgactcggtaatttcccctcaaacgtttggt
atactcaagggtatggccaaaacctggctcttggataaagtacgcaacccgggcggacca
tcgcaacacgcagtagatcatttctggcgttggttgagcagcccatctgcgcagatgtat
gaccccagcatgcagcgcttcgttcaaggattgatgaagaagacgtttatccaaatgttg
gcggaatttaaacgacttggctcccaagttgtcaaagccgattttggtcatattattcta
gtaacatcaaagcccccgggtaccgcaggtgcatatgcggcctacttgctgaatgctgta
aattctcatgacctatttactcacctcgaacttcaacctgatcgctattacgacttcctt
ttattcatggatagtgccaacctaggtggggtggtatcagaagatgcgtactcatcctca
gaaagctcaggtccttgcgtcgccatgaactggagcattgaatctttcttccctcctgca
gtgcgagccgcttttcaccaagaccttcggcgcattatcgtcgagctttacactgagcac
caaaatcatgccgatgtagatcgtgcgccactgcgtgttatagataaccttactcaggac
gcatcggctgccccccaagacgaagttcaacaaaaaacaaacgaagcagtcacaaactac
ctagagtcgcgtctaactcgtcgcttacttggtcgtgttgcaaaaatcttatcgtcgcaa
aaacaggcatttatagaagaagaaacacgcgaagaatggctttggccgttgcttccaggc
tctcaccgaacgatggccacccctgttattgaatatgtcaaagcaatgtgcgcgtgcctc
acccttatccgcacccacagcaatgaggttgggattctccgacgcaatctactggaattg
gttggagtgcgcgaattcgcaaacgaagctcattggtccgacccttctgcgcgctgtcgc
gtgccacacgtggtatgcaggacctgtactcatgtccgtgacctcgatctttgtcgcgac
gcggatctcatggaacgaacgccctcacgctcccgagcaggtgcgatggagacaaagtgg
gaatgctctgcctgtggttcggcatatgatcgtcgtgctatcgaatccactttaattgac
aacgttcgatctctaattgctgcacatcaagcccaagacctcaagtgtacaaggtgcaaa
cagattcgaatagacgatatgtcacctcactgcaaatgcgccgggccctggcaattgacc
gttggacgtgccgaggctctaaggcgcattcgagtcctagccaatgtcgctaccttccat
ggacttccattcttaaaggaatatgcagaggctaccatggcgcgatggtag

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