Rhizoctonia solani: RhiXN_06434
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Entry
RhiXN_06434 CDS
T09256
Name
(RefSeq) RNA polymerase II transcription factor B subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
rsx
Rhizoctonia solani
Pathway
rsx03022
Basal transcription factors
rsx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RhiXN_06434
09124 Replication and repair
03420 Nucleotide excision repair
RhiXN_06434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsx03021
]
RhiXN_06434
03400 DNA repair and recombination proteins [BR:
rsx03400
]
RhiXN_06434
Transcription machinery [BR:
rsx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
RhiXN_06434
DNA repair and recombination proteins [BR:
rsx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
RhiXN_06434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
67028713
NCBI-ProteinID:
XP_043181682
UniProt:
A0A8H7LIF5
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All DBs
Position
7:complement(join(843198..843266,843314..843531,843582..843669,843720..843779,843834..843980,844031..844064,844119..844225,844276..844355,844405..844546,844613..844804,844853..845229,845277..845415))
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AA seq
550 aa
AA seq
DB search
MSVVRARAKASFQKKPGYLVLTQRSLSWTEDKQKEPRLNLPNTSLQKMFFSKPGSASTSM
KVMDGPDPKINAYTFVFTSLKAVAEGNNFKELITNILTANIAQQQAAAREQAPATDTQAA
APVTITPRADRPLSVNDLRKFVLLKRADLAALHRELVMTGNLTETEFWAGREHLLSAEES
IERQRKGRPTQMLELRGAGTNEKGDIKITITPERAQQIFIEFPVVKRAYDENVPDPLSPV
EFWTRYLSSKLFDRNQASSRSAAAQHTIKDDPIFDKYLQKEDDGDEPLHQRAPPSTLLID
LNATHEDHGETGNSKDFTMKAGGLRSTLPLIRKFNEHSTNVLDAGLQPSKRQRIGNMDEL
YYSQLDMEDLRGPQYDAGIELGLQASSRILDSDSLENESENGKRSEPVDPRALVGTLRSW
HNNLSKFAPGKKQVEDAFTSLSQNVTERVNVKSRKNNLPDDLLQAMGNLQAATAEFLRQF
WSALYDDKDFAKDHVEKMASYLGSTYGKIAPMMTAARNQGHDPQVVRDAFTPTLDAVNKA
LAIYKARASV
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgttcgagcgcgggcgaaagctagcttccaaaagaaacctggttacttggtg
ctcactcaacgcagcctctcatggaccgaggacaagcaaaaagagccacgactcaacctt
cccaatacatctctgcaaaagatgttctttagtaaacctggaagcgcctcgacctccatg
aaagtaatggatggtcctgacccaaaaatcaacgcctatacattcgtgttcacgtcgctg
aaagcagtggcagaagggaacaattttaaagagctgataaccaacattctcacggcaaat
attgcccagcaacaggcggcagctcgtgaacaagctcctgctactgatacacaagctgct
gcaccagtcactataacaccacgagcagaccgacctttgagcgtcaatgatctacgaaag
tttgtcttgctgaagcgagcggatctggcggcacttcaccgtgagcttgtaatgaccggg
aacctcactgaaacagagttttgggcgggtcgtgagcatctgctatccgcagaagagtcc
attgagcgccaacgcaaaggccgcccaactcagatgctcgaattgcgaggtgcggggaca
aacgaaaagggcgatatcaaaattaccatcacacccgaacgtgctcagcaaatattcatc
gaattcccggttgtgaagcgtgcgtacgacgaaaacgtgcccgatccgctatccccagtg
gaattctggacccggtatctttcttccaaactgttcgatcgaaatcaagcatcttcgcgc
tcagcagccgcccaacataccatcaaagacgacccgatcttcgacaagtatctacaaaag
gaagatgatggtgatgaacccttgcatcagcgcgccccaccatccactctacttatcgac
cttaatgcgacgcatgaggatcatggagagacagggaactcgaaagacttcacgatgaaa
gcaggaggcttacgttcaacactgccgttgattcgcaaattcaatgagcactctaccaac
gttctcgatgctggccttcaaccctcaaaacgtcaacgcatagggaacatggacgaactt
tactactctcaactggatatggaagatttacgaggtccacaatacgacgcgggaatcgaa
cttggcctgcaggccagtagtcggatattggactctgatagtttggaaaacgagtctgag
aatgggaagcgctctgagccggtggatccacgcgctttggtcggaacacttcgatcatgg
cataataacttgagcaagtttgccccaggaaaaaagcaggttgaagatgcttttacgtcc
ttgtcccaaaatgtaaccgaaagagtaaacgttaaatcacgaaaaaataatttgccagac
gacctactgcaggccatgggtaaccttcaagctgctacagccgaatttttacgccaattt
tggtccgctttatatgacgacaaagattttgcgaaggaccacgttgagaagatggcttcc
tacttggggagcacctacggcaaaattgcccctatgatgactgcagcccggaatcagggt
cacgacccccaagtcgttcgggatgccttcactccaacactggacgcagtaaacaaagca
cttgccatatacaaagcgcgagcttcagtttaa
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