KEGG   Rhizoctonia solani: RhiXN_06567
Entry
RhiXN_06567       CDS       T09256                                 
Name
(RefSeq) RNA recognition motif protein
  KO
K12842  U2-associated protein SR140
Organism
rsx  Rhizoctonia solani
Pathway
rsx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    RhiXN_06567
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsx03041]
    RhiXN_06567
Spliceosome [BR:rsx03041]
 Complex A
  U2 snRNP components
   U2 related factors
    RhiXN_06567
 Complex B
    RhiXN_06567
SSDB
Motif
Pfam: RRM_1 CID Surp RRM_7
Other DBs
NCBI-GeneID: 67028846
NCBI-ProteinID: XP_043181815
UniProt: A0A8H8P0E4
LinkDB
Position
7:join(1245352..1245414,1245473..1245598,1245656..1245814,1245877..1245968,1246024..1246067,1246121..1246150,1246202..1246245,1246295..1246384,1246436..1246649,1246715..1247022,1247067..1247126,1247177..1247254,1247302..1247487,1247541..1248086)
AA seq 679 aa
MDKKKLAMMFNVDDDDAPPFQQKQLDEYKLAHYSQGVVRKSKREKEKEAAEAKRREEEEQ
AAQAYADFIDVFDSEGPKQKARSGGGGFVRAGGEGAYKPSGGRNPLDEGAPRSNFKDRPP
SPGPAKPKPKGQRAMDAFLEEIKRFGGDQAERESRFKKYAGSHGSSVSAIAAYESQSGSR
DRGDPATTNIFVANLPANIDENSLGMFFARIGPVGSVKIMWPRADPHNPPGSDISTSARR
GMSGFVSYMTRADAEACVRELDGFDWGGSVLRVGWSKAVPIAARAMYGGAGVGRGVQEGI
GKRTSGGDPGLGQGIIIGKGKGIVTARGIGLGTTIDVKHLVVLGLALEIATTLVVVDLHP
IRLGLAPAREHLRQRTLATSESHPRKKSLFTLLETREKNNPSFEFLWDDKNPGHLLYKHL
LDGASLPPPPPVFDEDGPHSAYSTDSGEESERERIRKGTLGKLARKRFHVLLRGLSGKRG
ELARCMAFSLEHAESAAEVAEIIISSLMVDSTPVPRKIARLHLICDILHNSAASITNAWK
FRQEFESRLGGVFDHLCAIHRSFPGRITAETFKKQVLSVVEVWEDWIVFTPEFTSELRKR
LDGKDVGEERKEGEERVEKVEERKVVSKFKAAAFGAVVEPAKEAEDLDGEKVEDIDGENL
DGENIDGENLDGENIDGEH
NT seq 2040 nt   +upstreamnt  +downstreamnt
atggacaaaaagaaattagcaatgatgttcaacgtcgatgacgacgatgctcccccattc
caacaaaaacaactagacgagtataaactcgcacactactctcaaggtgtcgttcgcaag
tccaagagggaaaaagagaaagaagcggcagaggcgaagaggagggaagaggaagagcag
gctgcacaggcgtatgcggactttatcgatgtctttgattcagagggtccgaagcaaaaa
gcccgttctggaggaggggggttcgtacgtgccggtggcgaaggtgcttataagccgtcg
gggggaagaaaccccttagacgaaggagcgcccaggtctaacttcaaggatcgcccgccc
tctccgggccccgcaaaacccaaacccaaaggccagcgtgcaatggacgcatttctggaa
gagataaagaggttcggcggagaccaagctgagcgcgagagcaggtttaagaagtatgcg
ggatcccatggcagttctgtttctgctattgctgcatacgaaagtcaaagcggcagtcga
gacagaggagacccagctacaacaaatatattcgtagcaaacctcccagcgaatatcgac
gaaaactcccttggaatgttctttgcgcgcatcggccctgttggatccgtgaaaatcatg
tggcctcgtgcagatccacacaaccccccaggatcggatatttccacttctgcccgacga
ggaatgtctggttttgtatcatatatgacccgcgccgacgctgaagcatgcgttcgtgaa
ctggacggattcgattggggtggaagtgtgcttagggttggatggagtaaggctgtgccg
attgctgcgagagccatgtatggaggagcaggagtcggtcgaggagtccaagaagggata
gggaaaaggacaagcggaggagatccaggtctaggtcaagggatcatcatcgggaaaggg
aaagggatcgtgaccgcgagagggataggactagggactacgatagacgtaaaacatctc
gtcgttctaggtctcgctctcgagatcgccaccacactcgtcgtcgtagatcttcatcct
attcgactcggtctcgctcccgctcgagaacacctacgccaaaggaccttggctacctcg
gaatcacacccacgcaagaagagtttattcaccttgttggaaacgagggagaagaataac
ccaagctttgagtttttgtgggatgacaagaatcctggtcatttgttgtataagcatttg
ctagatggggcgtcgttgcctcctccgccacctgtattcgatgaagatggcccgcactca
gcctactcgacagactcgggcgaagaatccgagcgggagcgtatccgcaagggaaccctc
gggaaactggcccgaaagagattccatgtcctccttcgcggtttgtcaggcaaacgaggt
gaacttgcacggtgcatggcattctcgctagagcacgccgaatcggctgccgaggtcgcg
gaaataatcatctcatcgctcatggtcgattcgacacccgtcccgcgcaaaatcgcccga
ctacacctgatctgtgatattttgcacaattcagccgcctcgatcaccaacgcgtggaaa
ttcagacaggaattcgaatctcgtctgggaggagtgttcgaccatctgtgtgcaatccac
cgctcgttccctgggcgcatcacggccgagacgtttaaaaagcaggtcctgagcgttgta
gaggtgtgggaagattggattgtgtttacgcccgagtttacgagcgagttgaggaagcgg
ttggatgggaaggatgttggggaagagagaaaggagggagaagagcgggtggaaaaggtg
gaggagagaaaggttgtgagcaaattcaaggctgctgcgtttggagcggttgtggagccg
gcgaaggaggctgaggatctggacggggaaaaggttgaggatatcgatggagagaatctc
gacggcgaaaacatcgatggggagaatctcgacggagagaacattgatggggaacattga

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