KEGG   Rhizoctonia solani: RhiXN_06594
Entry
RhiXN_06594       CDS       T09256                                 
Name
(RefSeq) superkiller protein 3 SKI3
  KO
K12600  superkiller protein 3
Organism
rsx  Rhizoctonia solani
Pathway
rsx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RhiXN_06594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsx03019]
    RhiXN_06594
Messenger RNA biogenesis [BR:rsx03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     RhiXN_06594
SSDB
Motif
Pfam: TPR_CcmH_CycH TPR_2 TPR_16 TPR_1 TPR_12 TPR_14 TPR_19 TPR_8 TPR_17 TPR_11 TPR_9 TPR_22 TPR_15 TPR_30 PspAA DUF2225
Other DBs
NCBI-GeneID: 67028873
NCBI-ProteinID: XP_043181842
UniProt: A0A8H8NYA7
LinkDB
Position
7:complement(join(1318945..1319394,1319447..1319513,1319562..1320160,1320216..1320422,1320476..1321269,1321353..1321413,1321465..1321829,1321886..1322295,1322346..1322503,1322561..1322751,1322801..1323053,1323105..1323389,1323440..1323515,1323574..1323659,1323712..1323762,1323817..1323874,1323934..1324017,1324068..1324105))
AA seq 1410 aa
MSSVIKAKLKVSREAINNKDWKTAQRTAEDVLSYDAANYNGNVFLGLASFELNEIDKSEQ
AYRKAIDIQPDQLLAWRGIEKIQEKTERWDDLDETLEKEIEIASNSGDATKVAEFLQKLI
EVRREHGSALEVTNALSLLLPESRLYDVLSTIPPLEPTAPTKTTIYDIQAAMGNSLPVLE
EIVAVVERSEEEAYTKEVERRRTRINAGTQQEVQNEVGRDIWGASKLPALYEDILNHPNT
SDQLRRDTESKLLRHRQRYLYALPTNSEYASEKNAAYKVVEDMASGAVLLGLPDELAWSC
YMENLDVYDIEGYDFGVFRRFSKLFRGKPLATLLTAYLNYLNIPLDDDESETAVSETVVA
QEQDSSYDPVETILTNLAKLPKSIIAHRIVGDVYTADGDHKNAIRIAEAGINLVKRAENN
TGKKLPLVRKAFDVILATGLVHLYPPKHHARASRILEEVLARNPGHVGALMARAYIYQYA
KNWGDAIKHFQRVMKETDGDDTVGWVGVRAREEVAWCMAMDGQLETSLSELREVSSALAL
GDAPPDDRARVEWRLGKCLWDIGGERRDESYKRFIGALKFNPSYASAFTSLGIYYNEHAN
PPDALRASKCFQKAFELDASQGEAARRLAEGFAEEREWDLVEVVARRTIEGEGGLTGGLD
KPSTEVARHQPTFAWAWKAIGLVEMNRHNYAPAIQSFQVALRANEGQAIAPSNEWIAAYI
VGTVQRDMGLHLEAVDTFNKILADHPGLEDPMIIIGLGKAYLELGCLEAQTGYSIRAEIS
WCSSLDYAFQLISEPIMQVARRVGWRLAYDALTELGKKRVFLNVPAVQGALAPLAESLVA
RAKDFERHLGDAFLVSEIVDSLLGVPSGGTALKMAAAVSAYLVTLSTDNEDSLANSWAGL
AIATFNARPFENAIEQRKKLESVAIVAVKHALRRDPSNDQLWSLYGSLSFADDPKISQHA
FIKAIEIDGKEADHWARLGLLYLNNDDVELAQHVFVRSQILDPDASLAWVGKSLLAVRNQ
KHAEAQTLLEHAIGLASYSPRADKEYGIKCFVHTANTSTVETLFPAFFALQRYCQHFSDD
SSGLHLLALVAERLGLISLATDLLMQAIPILETLYEATEDAHIAEHYGIAKVNLGRLQLA
EGDYSAALDAFNTALALLPESTEDDTIKTCRAHAQASSGIAHYMLDDFEAAVGMFEAAVA
SAPVSTHVRENVTISLCQALWEVGSEDAKEAAKSQLLEMVEQDPSNLECIVMLVAIGTLN
NEPDLVDAALSEILGMPTEKRQVLDPGHQVDRILVQHHIAQGNLDQALKVVRNAVALKSA
TTSSTRALLEFLVQTGDDKAVEVAISALKNISERNELSPLLRIAGVASAKVGKLEPSVQK
GLEKAVMLAPWDERNYLALTYVLNRLPKDT
NT seq 4233 nt   +upstreamnt  +downstreamnt
atgtcaagcgtgatcaaggcgaaattaaaagtgtcaagagaggctatcaataataaagat
tggaaaactgctcaaaggactgcagaagacgtcctttcatacgatgcagccaactacaac
ggaaacgtgttcttgggtcttgcatcgtttgagttaaatgaaatagacaaaagcgagcaa
gcatatcgaaaagcgatcgatatccagccggatcaattacttgcttggcggggcatcgag
aagattcaggagaagacagaacgctgggatgatttagacgaaaccttagaaaaggagatc
gagattgcctccaattcgggtgatgctaccaaggtcgcagaattcctccagaagctgatt
gaagtcagaagagaacacgggtcagcacttgaggttaccaatgctttgtctctccttttg
cccgaatctcgattatacgatgtattgtccactatacctccactagaacctacggctcca
accaaaactacgatatacgatattcaagcagcgatgggtaattctcttcccgtactcgaa
gagatcgtagctgtggtcgagcgttcggaagaggaggcgtacacaaaggaagtggaacga
aggcgaactcgaatcaacgcaggtacccaacaagaggtccaaaacgaagttggccgcgat
atttggggagcttccaagcttccggcgctgtacgaagatatattgaaccatccaaacact
tcggatcaactaaggagagacacagagtcgaagctgcttcgccaccggcagcgatatctg
tatgctctccctacaaactccgagtatgcgtcggaaaagaatgctgcgtacaaggtcgtt
gaagacatggcgagtggtgcggttctgctggggcttccagacgagttagcctggtcttgc
tatatggaaaacttggacgtctatgacattgagggatacgacttcggggtattccgacgg
ttttccaagttatttcgcggaaagccactagcaacattgctcacagcatacttgaattat
ttgaatattcctctagacgatgatgaaagcgagactgccgtttcagaaaccgtggttgcc
caggaacaagacagctcttatgaccctgtagaaacaattctgaccaatcttgcgaaactt
cccaagtcgattattgcacaccgcattgttggggatgtatacacagccgatggtgatcac
aagaatgctatacgtatagccgaagcaggaatcaacctagtaaaacgagctgaaaacaat
acaggaaaaaagttgccactggtgcgaaaagcctttgatgtgattttagcaaccgggctg
gttcatctttacccacccaagcatcatgctcgtgcatcgcgcatattggaagaagtactc
gctcgtaacccaggccacgttggcgcacttatggctcgcgcatatatttaccaatacgcg
aagaattggggagatgccatcaagcacttccaacgagtgatgaaagaaacagatggagac
gacacggttgggtgggttggtgttcgggctcgagaagaagttgcgtggtgtatggcaatg
gacggtcaacttgagaccagccttagtgaactgcgcgaagtttcttcagctctggccttg
ggtgatgcgcccccagatgatagggcacgagtggaatggcgtctaggaaaatgtttatgg
gatattggaggcgaacggcgcgacgaatcttacaaacgttttattggggctttgaagttc
aacccgagctacgcatctgcgttcacatcattaggtatttattataacgagcatgcgaac
cccccggatgcacttcgagcttcaaaatgtttccaaaaggcgtttgaattggacgcaagt
caaggagaggcagcgcgaaggcttgccgagggctttgcggaagagcgagaatgggacctt
gtggaagttgtcgcccgacgaactattgagggagaaggcgggttgaccggagggctcgat
aaaccaagtacagaggttgctcgtcatcagccaactttcgcatgggcatggaaggctatt
gggctagttgagatgaatcggcataactatgcacctgctatccaatcgtttcaagtggca
ctgagggcgaatgaagggcaggccattgccccttcaaacgaatggattgccgcatatatt
gtcggcaccgttcaacgagatatgggccttcacttagaggcagttgatacattcaacaag
atactggctgatcaccctgggcttgaagatcctatgattatcattgggcttggaaaagct
tacctggaactaggttgtttggaagctcagacaggctattctattcgcgccgagatttcg
tggtgttcttcgttggactatgcgtttcagttgattagtgagccaataatgcaggtcgct
cgaagggttggatggagattggcttatgatgccttgaccgaacttggcaagaagcgggta
ttcttgaacgtacctgcagtacaaggcgcgcttgccccgctcgcagagtcactcgtagca
cgtgcaaaagatttcgaacgtcacttaggagacgccttcttggtttctgaaatcgttgat
tctttacttggtgtcccaagcggcgggacggcactcaagatggcagccgcagtcagcgca
tatctggtaacactttcgaccgacaatgaagattctctggcaaattcatgggctgggctt
gctatagctacttttaatgctagaccatttgagaatgctattgagcaacggaaaaaatta
gagtctgtggcgattgtggcggtgaaacatgctctacgacgcgatccctcaaacgaccaa
ctctggagcctttatgggtccttgtcattcgctgatgaccctaaaatctcacagcatgcc
ttcataaaggcaatagaaatagacggcaaggaggctgatcactgggccagacttggccta
ctatacctcaacaatgacgatgtcgagcttgctcaacatgtttttgttagatctcagatt
cttgaccctgatgccagtttggcctgggttggaaaatctcttttagcggtacgcaatcaa
aagcacgctgaagcacagacacttttggaacatgcgattggattggcctcgtactctcct
cgagcagataaggagtatgggatcaagtgttttgtgcacactgcaaatacatctacggtt
gagacattgttcccggccttcttcgctctacagcgttactgccaacatttctccgacgac
tcatctggattacacttgttagctctggtcgcagaacgcctgggtcttatctcgctggct
accgacctcttgatgcaggccattccgatattagaaaccttgtatgaagcaacggaggac
gcgcatattgctgagcactatgggattgctaaagttaatctcggacgactacagctagcc
gagggggactactctgctgcattagacgcgttcaacactgcactggctttgttacctgaa
tccactgaggacgacacaattaaaacatgtcgtgcccacgctcaagctagttcaggaatt
gcgcattacatgctagatgatttcgaagctgctgttggaatgttcgaggcagctgtggcg
agtgcacctgtatcgacgcatgtgcgtgaaaacgtcaccatatcactctgccaggctctt
tgggaggtgggttctgaggacgcgaaagaggcagcgaaatcccagctgttagaaatggtc
gaacaagacccctctaatttagaatgcattgtaatgcttgtggcgatcggaacacttaac
aacgaacctgacctggtagatgcagcgttgtctgaaatcctcggtatgccgaccgagaag
cgtcaggttctagatcccggccatcaagtagatcgaatactagtacaacatcacatagca
caaggcaaccttgaccaagcgctcaaagtcgttcggaacgccgtcgccctcaaatctgct
accacttcttctactagagccttattggagttccttgtccaaacaggagacgacaaggct
gttgaagttgctatatcagcattaaagaatatctccgagaggaatgaacttagtcctctc
ctaaggattgctggtgttgccagtgcaaaagtgggcaagctggagcccagtgttcagaag
gggcttgaaaaggctgtgatgctggctccttgggacgaacgcaactaccttgcattaaca
tatgtactgaacagattaccaaaagacacttga

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