Rhizoctonia solani: RhiXN_07026
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Entry
RhiXN_07026 CDS
T09256
Name
(RefSeq) pectate lyase
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
rsx
Rhizoctonia solani
Pathway
rsx00040
Pentose and glucuronate interconversions
rsx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RhiXN_07026
Enzymes [BR:
rsx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
RhiXN_07026
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GFIT
Motif
Pfam:
Pectate_lyase
ALKL1_2
Cytomega_UL20A
Motif
Other DBs
NCBI-GeneID:
67029305
NCBI-ProteinID:
XP_043185314
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All DBs
Position
13:join(547012..547186,547241..547340,547410..547597,547652..547931,547991..548003)
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AA seq
251 aa
AA seq
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MVQLSFATLAVVAGVLAQTALAIPSEKRAASCSFPNPSASTNVKLSEARTIKAGESFDGK
NLRYGRGVTCGGQKEGGTKDAVFILESGATLANAVIGADQNEGVHCQGPCTIRNVWFEDV
CEDAITIRQSSGTTTITGGGAKSASDKVVQHNGGGLVKIDSYCVQDFGKLYRSCGNCSTQ
VKREVQISNIIARNGKLLAGVNSNFGDVATIDTKTNSYTSLTSVCDTFQGNNKGDEPTTL
TKNTANASCKF
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggttcagctatcgttcgctaccctcgctgtcgtcgccggtgtgcttgctcagactgcg
ctcgccattccttcggagaagcgtgcggccagctgctcgttccctaatccatccgcatct
accaacgtcaagctatctgaagctcgtaccatcaaggctggcgaaagctttgacggcaag
aacctacgttatggccgaggcgtcacatgcggcggtcagaaggaaggcggtaccaaggac
gccgtcttcatcctcgagtctggtgccactcttgctaacgctgtgatcggcgccgaccag
aacgagggagtacactgccagggcccttgcaccatccgcaacgtctggttcgaggacgta
tgcgaggatgccattaccatcagacagagctccggcacgaccaccatcaccggcggaggc
gccaagagcgcgtccgacaaggttgtccagcacaacggcggaggtctcgtcaagatcgac
tcgtactgcgttcaggacttcggcaagctctaccgctcatgcggtaactgcagcactcag
gtcaagcgcgaggtgcagatcagcaacataatcgctcgcaacggcaagctgctcgccggc
gtgaactcgaacttcggagacgtggcgacgatcgacaccaagacgaactcgtacaccagc
ctgacatcggtgtgcgacacgttccaaggcaacaacaagggcgacgagcccacgacgctg
accaagaatacagcgaacgccagctgcaagttctaa
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