| Entry |
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| Name |
(RefSeq) E3 ubiquitin-protein ligase synoviolin
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| KO |
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| Organism |
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| Pathway |
| rsx04141 | Protein processing in endoplasmic reticulum |
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| Brite |
KEGG Orthology (KO) [BR:rsx00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
RhiXN_07034
04120 Ubiquitin mediated proteolysis
RhiXN_07034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:rsx04121]
RhiXN_07034
Enzymes [BR:rsx01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
RhiXN_07034
Ubiquitin system [BR:rsx04121]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
RhiXN_07034
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
13:join(568978..569067,569182..569216,569301..569329,569387..569787,569840..569959,570008..570291,570526..570649,570706..570798,570850..571002,571052..571210,571268..571794,571847..573383)
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| AA seq |
1183 aa
MDVNEDTSFSAESYFETQPPPAGIEEAIQSSGGTTVPLELHVVRFLDNFSAGTRGATSAE
YFLKAGYAVIFMHRQFSLQPFSRHYSHTTNPFLDFLELHPPAEGSNGDQPVITVSPSKRT
QLAEVLATYQEVHRARTLHTLTFVTINDYLYLLRGISSILKSAGRKGMYYLAAAVSDFFV
PRKRLSEHKIQSRKGSLIIEMDQVPKILKPLVEEWTFGGFVVSFKLETDKDLLIPKARAA
LERYGHQVVIANRLDNRKYEVIFVTRADDGPGSKIPKFKEEVVRLKDNDSEIEEDIVAKL
ASSHDQWIEGGCAGLTGDHKLLLYGAVSTTLASLAVYTTFSTHSNFYSAVVHLSKSNGSI
LTLANFMVFVTLMVAKVMQLIFFGPLRTNEVERLYDRTWYFLTESLLAFTIFREDFDAAF
VCLFGGLLFVKSFHWILADRVEAMDQQPYPGPPKSFHIRTLALFNLLALVDVVVIGSLAE
VILHEGVDGLVLFVSEYAILLASLFNSWLKYLISVYDIYRASRRGGDDAPPWEHKSMYIF
YVELLTDFLKLSTYLAFFLTVLTYYGLPLNIIRDVFLTARSFIGRVRDLLRYRAATRDMD
HRYPDALPTEMEALGDRTCIICREEMVSRGTAGAGAVTGGPNTTPKKLPCGHIFHFHCLR
SWLERQQSCPTCRRTVLESGRPGNAANGNAANANPAAPNPQAGAVPNPPQGAVELFNRVW
NAPGQGPQPPAAPAVANGQAPVAPPPPFGQLPPFPWHAGQINQPQWPPQVPRQFQGFNAG
GQWYPWGAPPAENERGQRPQNDSTPARTVPSTSGLGLPSSPPPLDRDVTSMQPNSSGPPP
PAPTPVRQVITVPNKTPPEAKEGAKSTDSNEIVNNGGPGTSAREAAALAALRRFQAGRST
ESLKSPGLSGSKPGSLSATNSMEPKSTPRALSSSPSGSIDLSSRAQNTVQEAAEGADRLE
RSPTSLEQGVRTQSLPGATSATTSSRTHAPNLIPLYNPGSNTPGHGSNIPSPYFLPSGSS
TAPLIDVRQPSAPRSSPYLFGPPSSGPRPPSLPRHGQLPSDVSDSQLRQLDRVTREAIDE
RLRVLESVQTTVWQCVEELTRLRSSLPDPGLEERRGSTSGLGGGGPIGSTNGSTSSFEAE
AFAPNIQVDSTESSDIDVKGKGKGKALADVGDETEDTDVVDTR |
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| NT seq |
3552 nt +upstreamnt +downstreamnt
atggacgtcaatgaggacacctcattctccgctgaatcatacttcgaaacacaaccacct
ccagcgggtatagaggaggctattcagtcgagcggagggacaaccgtccctttggagctt
catgtcgtcagatttctggacaactttagtgctggaactcgtggggcgacatctgcagaa
tactttctgaaagctggatatgcagttatattcatgcatcggcagttcagtctccagccg
ttcagtcggcattactctcacaccacaaaccccttcctcgacttcctcgaactacatcct
ccagccgaaggaagcaacggtgaccaaccagtcatcactgtctcgccttcaaaacgcacg
caactcgcagaagtactggccacttatcaagaggtccaccgagcgagaaccctccatact
cttacctttgtgacaatcaatgactacctttacctcctacgaggaataagtagtatatta
aagtcggcaggacgcaaagggatgtattatctggcagcggccgtcagtgacttttttgta
ccaagaaaacgcttgtcggagcacaaaatccagtcgagaaaggggagcctcattattgaa
atggatcaggttccaaaaatcctaaagccacttgtggaggaatggacatttggagggttt
gtagtatcattcaagctcgagacagacaaggatcttcttatacccaaagctcgtgcagcc
ttggaaagatacggtcatcaggtggtgatcgcgaataggcttgacaacaggaaatatgaa
gttatttttgttacacgggcggacgatggacctgggagcaaaatccctaagttcaaagaa
gaagtagttagactgaaggacaacgactcggaaatcgaggaggacattgttgcgaaactc
gcatcatcccatgatcaatggattgagggaggttgtgcggggttgactggtgaccacaaa
ctgctgctatatggtgctgtttcgacgactctggcatcattggctgtgtacaccactttc
agcacacacagcaacttctactcggccgtagtccatttgtccaagagcaatgggagcata
cttacacttgccaatttcatggtgtttgtaacactaatggtggctaaagtaatgcaactc
atattctttggaccattgcgaaccaatgaagtcgagcgtctctatgatcgaacttggtac
ttccttaccgaatccctgctcgcattcacaatattccgtgaggactttgatgcagccttt
gtgtgtttatttgggggacttctctttgtcaagtcgttccattggatacttgcagatcga
gtcgaggcgatggaccaacaaccttatccgggccctccaaaatcatttcatatacgtaca
ttggctttattcaatctccttgctctagtcgatgtggtggtgataggttctcttgccgag
gtgatactccatgagggggtcgatggtctggtattgtttgtgagcgagtatgccattctg
ttggcatccttattcaactcgtggctcaaataccttatttcagtgtatgatatctatcga
gcatcacgacgaggtggcgatgatgcaccaccctgggagcacaagtccatgtacatcttc
tacgtcgagcttctcacggatttcctcaaactcagcacttacctggcattcttccttacc
gtactcacttactatggtcttcctctcaacattatccgcgacgtgttcctcacggcccgc
tcctttattggtcgtgtgcgtgacttgctccgttaccgggccgcaacgagggatatggat
catagataccctgatgctcttcccaccgaaatggaggctctgggagaccgcacctgcatt
atctgtcgtgaagagatggtttcgagaggtactgctggtgcaggtgccgttacgggaggt
ccaaatacaacaccgaagaaacttccgtgtggtcatattttccactttcactgtctacgt
tcttggcttgaaagacagcaaagctgccccacatgccggcgaactgtgttggaatctgga
cgacctggaaacgcagctaatgggaatgcagcaaacgccaatcctgccgcgcccaaccca
caagctggtgctgtacccaaccctcctcaaggtgctgttgaacttttcaatcgtgtgtgg
aatgcacctgggcaaggtcctcaaccacccgctgcacccgctgtcgcaaacggacaagca
ccagtcgcaccccctccgccttttggacaactcccgcccttcccctggcacgctggtcaa
atcaatcaacctcagtggccccctcaggtaccacgacagttccagggcttcaatgctggt
gggcagtggtatccttggggtgcccctcctgcggagaacgaacgtggacagcgaccgcaa
aatgactcgacccctgcccgaactgtaccatcaacatctggtctaggtcttccttcctct
ccaccacctctcgatcgtgacgttacgtctatgcagcccaattcttctggaccaccaccc
ccagcgccaacacccgtgaggcaggttataacagttcctaacaaaactccgccagaagcc
aaagagggcgcgaagtctaccgattcgaatgagatagtgaacaatggtggacctggaaca
agcgcgagagaggcggctgcattggcagctctacggagattccaagctgggcgcagcact
gaatcattaaagtctcctggtctgtctggctccaaacctggcagtttatccgccacaaat
tcaatggagcccaaatctactcctcgagcattgtcatcctctccatctgggtctatcgac
ctctcgagccgagctcagaacacggtccaggaagccgcggagggggctgatcgattagaa
agatctcctacgtctttggagcaaggtgtccggacccaatccctccccggcgccacatca
gccaccacatcctctcgaacacatgcacctaatttaattccgttgtacaaccccggctcc
aacaccccaggccacggttccaatattccatcgccatatttcttgccttctggctcttca
accgcgcccttgatagacgttcgccagccctcagcaccccgttcgtcaccgtacttattc
gggcctccttccagcggtcctcgtccaccatccctacccaggcatggtcaactcccatca
gacgtctccgactctcagctgcgccaactcgatcgagtgacccgcgaggccattgacgaa
cgacttcgggtcttggaaagtgtacagactacagtgtggcaatgcgtagaagaactgaca
aggctccgaagctcacttccggaccctggactagaggaacggcgggggtctacctcaggc
ttgggtggcggaggacctatcggtagcacgaatggaagcacgtccagtttcgaggccgag
gcgtttgcacctaatattcaggtggattctacagagtcatcagatatagatgtgaaaggg
aagggaaagggaaaggcactggcagacgtaggggatgagaccgaagataccgacgtagta
gacacccgatga |
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