Rhizoctonia solani: RhiXN_07072
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Entry
RhiXN_07072 CDS
T09256
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
rsx
Rhizoctonia solani
Pathway
rsx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RhiXN_07072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsx03009
]
RhiXN_07072
Ribosome biogenesis [BR:
rsx03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
RhiXN_07072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U3_assoc_6
TPR_14
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
Suf
Motif
Other DBs
NCBI-GeneID:
67029351
NCBI-ProteinID:
XP_043185360
UniProt:
A0A8H8T235
LinkDB
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Position
13:join(717940..717987,718032..718176,718225..718396,718452..719181,719493..719675,719723..720289)
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AA seq
614 aa
AA seq
DB search
MLPELKELEERGIFSQPEARAILKQRTAFESALIRRVALKSDYIKYVQYEITLEALRKKR
AARLNNTDNKSSLADYCIVRRQFFILERAVRKFKNDVSLWVQYIELARSNNARSLVGKLC
SRALSLHPTSPSLYIIAASHELDSSLSPTGARALLQRGLRINPESIELWTEYIRMELGYC
EGLRRRWKTLGIDPKTQNEEGQAIDAIISGAIVKAAISSATESLPTLALLGSLQALLLTY
PTELRTKLIEHLHSEFATQNTGSGPSGEDFRCGAVFLRAIVDIPARSLEDGAQLPTVLPL
RPLVAAAFPKKATPFCQEEQTGEFVKRMQKASEVLSSTGRTDLRVAELYARWVAAWVAVV
TEDNLRSFDIFSPKHYSEANPKLWEEARDRAKEHPGEEDLLVKLWLWGVNHLPKDPASPL
RAETWAIILRGTLSHRSLNLHSKLLVHRLYDSENQSSSDRITLAKKLISQYRPSVLFFDL
AMEQEFQKISASPSQESGGRERPAKRSKRSGCEASADSTTQADIACLTALYTAWRIIPEQ
SIPAALKYARVLYQLGEEKCAEDSIAAVGGSKGGLRQEWDKVRNELECLVIGAGKMEGTE
QPDKDIALDDVEFN
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgctccccgagctcaaggagctcgaggaaagagggatattctcgcagccagaagctcgg
gccatactaaagcaaaggactgcctttgaatcagcgctaattaggcgtgtagctctcaag
tcggattatatcaagtatgttcagtatgaaatcactctggaagctcttaggaagaagcgt
gctgctcgactcaacaataccgataataagtcttcgctcgccgattattgcattgtcaga
cgccagttcttcattctcgagcgagcagttcgcaagttcaagaatgatgtatcgctttgg
gtacagtatatagaactcgccaggtccaataatgctcgatcacttgttggaaaactttgc
tcgcgggctctttcgttacaccctacctctccttctctatatattatcgccgcatctcat
gagctcgactcatccctatccccaaccggtgcccgtgcgctccttcaacgaggcctacgg
ataaatcccgaatctattgaactttggacagaatatatacgcatggagcttgggtactgt
gagggacttcgacgccgttggaaaacacttggaatcgatcctaaaacacagaatgaggaa
gggcaagcaattgatgcaattatttcgggagcgattgtcaaggcggctatatcgtctgcg
acagagtccctgcctacactggcacttctaggttctctacaggccttgcttctcacatat
cccaccgaactccgtaccaagttgattgagcaccttcattctgaatttgcaactcaaaac
actggatcggggccttctggagaagactttcggtgcggtgccgtattccttcgtgcgatc
gttgatatcccagcgaggtcgctcgaagatggggcccagcttcctactgttctacctctc
cgaccacttgtagctgctgctttccctaaaaaggcgacacccttttgccaagaagaacaa
accggtgaattcgtgaagcgtatgcagaaggccagtgaggtgttatcatcaaccggcagg
acggatttgcgtgttgctgagttgtatgcgcgatgggtagctgcttgggtagcggttgta
acagaggataacttgcgatctttcgacatattctcccccaagcattattccgaagccaat
ccaaaattatgggaagaggcccgggacagggctaaggaacacccaggagaggaggatctc
ttggtcaaactctggctttggggagttaatcacttacccaaggacccggcatctccacta
cgagcggagacttgggctatcatacttcgaggaaccctatcgcatagatcactcaatctt
cattcaaaactactcgtacaccggttgtacgactcagagaatcagtcctcaagcgaccgg
atcacattagccaagaaactgatttcccagtaccgtccttctgtcctgttcttcgacttg
gcgatggaacaagagttccaaaaaatttcggcctcgccaagccaggaatcgggaggtcgg
gagcgcccagccaagaggagtaaacgatctgggtgcgaagcttcagccgattctactact
caggccgacattgcatgtcttacagcactctacacggcgtggcgcattatccctgagcag
agcatccctgcagcactcaagtacgcaagggtgctctatcagttgggcgaagagaaatgt
gcagaggattcaattgcggctgtgggtggatcgaaaggaggattaagacaagagtgggac
aaggtcaggaatgaactggagtgtcttgtgatcggtgcgggtaaaatggaagggactgaa
caacccgacaaggatatcgcactggatgatgtagagttcaattag
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