Rhizoctonia solani: RhiXN_07389
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Entry
RhiXN_07389 CDS
T09256
Name
(RefSeq) WD40 repeat protein
KO
K15542
polyadenylation factor subunit 2
Organism
rsx
Rhizoctonia solani
Pathway
rsx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
RhiXN_07389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsx03019
]
RhiXN_07389
Messenger RNA biogenesis [BR:
rsx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
RhiXN_07389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
WDR55
Beta-prop_Aladin
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
67029668
NCBI-ProteinID:
XP_043185677
UniProt:
A0A8H8P6H3
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Position
13:join(1758000..1758215,1758269..1758337,1758388..1758492,1758545..1758739)
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AA seq
194 aa
AA seq
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MAQTTTSDRLPTTRPTAPSTWRATRHLTPLPRPPVDPELDAPPKMGPDGRIIKKVRPRRT
IDLWAGVARWEMIKKVKPVGARVPVLKPAASYIIDMLPPKAYTDDIATSITTKFVHTSTN
KVRCPVNCVVWTPEGRRILTGSTSGEFTLWNGLTFNFETILQAHDNAIRALAFSHLGDIS
SAPTIWRIKYYQPI
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaacaaccacgtcggatcgtctgccaaccactcgacctactgcaccatcgaca
tggagagccactcgacatttaactcctcttcctcgacctcctgtcgaccctgaattagac
gcgcctcccaaaatgggacctgatggtcgaataatcaagaaggtcagaccacgacggacg
attgacttatgggcaggagtagctcgatgggaaatgattaaaaaagtaaagcccgttggc
gcgcgggtacctgttctaaagccagcagcatcgtacataatagatatgcttcctccgaaa
gcatatacagatgacatagccacgagcataaccactaaattcgttcacacgagtacgaat
aaagtgcgatgcccggtcaactgtgttgtttggactcctgaagggagacgcatcttgaca
ggctcaaccagcggcgaattcaccctctggaacggactcacattcaactttgagaccatt
cttcaggcccacgacaatgccattcgagcgctcgcattttctcatctgggggatatctca
tcagcgccgaccatctggcgtatcaagtattatcaaccaatatga
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